Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC011445.2-201ENST00000599274 173 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 SUMO2P15-201ENST00000604285 278 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 AC087385.3-201ENST00000620477 187 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DMAP28067 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DMAP28067 Z82217.1-201ENST00000625157 8149 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 MFSD8-242ENST00000641690 4199 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DMAP28067 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 EIF2AP4-201ENST00000424793 1781 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DMAP28067 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 RN7SKP149-201ENST00000363008 344 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 RPL23AP26-201ENST00000412728 464 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 PTP4A1P5-201ENST00000420305 455 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 SKP1P1-201ENST00000438081 489 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AL353898.1-201ENST00000444055 238 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 RPL31P20-201ENST00000449593 360 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 ANP32BP2-201ENST00000454525 545 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 AL136097.1-201ENST00000456945 913 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 RPL5P13-201ENST00000462840 709 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC004801.2-202ENST00000463559 283 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AP001086.1-201ENST00000494882 321 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 RN7SL101P-201ENST00000496350 279 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AP001781.1-201ENST00000530977 207 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC106785.3-201ENST00000564064 847 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC027281.1-201ENST00000574178 758 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AP003117.2-201ENST00000606010 545 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC012531.5-201ENST00000611375 151 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 AL592295.2-201ENST00000612578 206 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DMAP28067 AP005264.7-201ENST00000625003 745 ntBASIC3.57□□□□□ -1.84
HLA-DMAP28067 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DMAP28067 UBE3AP2-201ENST00000429033 2259 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DMAP28067 DCAF13P1-201ENST00000495256 1330 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 RNU1-130P-201ENST00000363930 160 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 RNA5SP435-201ENST00000364044 108 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 SNORD6-201ENST00000365444 73 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 RNA5SP167-201ENST00000365461 116 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DMAP28067 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 MIR1179-201ENST00000408703 91 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 BTF3P9-201ENST00000418784 283 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 AL139095.3-201ENST00000419672 1203 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DMAP28067 NPM1P34-201ENST00000428821 893 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 PTMAP6-201ENST00000439110 327 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 CEACAMP7-201ENST00000444105 496 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 HMGB3P30-201ENST00000457863 606 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 RPL7P48-201ENST00000461513 746 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 RPL23AP14-201ENST00000468281 468 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC007537.2-201ENST00000472093 511 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms