Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.52□□□□□ -1.53
ATF4P18848 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.52□□□□□ -1.53
ATF4P18848 SUB1P2-201ENST00000556401 297 ntBASIC5.52□□□□□ -1.53
ATF4P18848 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.52□□□□□ -1.53
ATF4P18848 MIR4685-201ENST00000578185 69 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.52□□□□□ -1.53
ATF4P18848 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.52□□□□□ -1.53
ATF4P18848 OR5AH1P-201ENST00000595968 283 ntBASIC5.52□□□□□ -1.53
ATF4P18848 KC877982.1-201ENST00000602313 470 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AL359704.2-201ENST00000604335 521 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC115621.1-201ENST00000604653 858 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC006335.3-201ENST00000613408 292 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.52□□□□□ -1.53
ATF4P18848 AC009704.2-201ENST00000618739 483 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC012150.2-201ENST00000621300 544 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC139792.3-201ENST00000623525 224 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC040168.1-201ENST00000623594 991 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AL159972.1-201ENST00000625150 448 ntBASIC5.52□□□□□ -1.53
ATF4P18848 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.52□□□□□ -1.53
ATF4P18848 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.52□□□□□ -1.53
ATF4P18848 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATF4P18848 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
ATF4P18848 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATF4P18848 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.51□□□□□ -1.53
ATF4P18848 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
ATF4P18848 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.51□□□□□ -1.53
ATF4P18848 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC5.51□□□□□ -1.53
ATF4P18848 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
ATF4P18848 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
ATF4P18848 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 RN7SKP257-201ENST00000364525 309 ntBASIC5.51□□□□□ -1.53
ATF4P18848 RNY4P16-201ENST00000364768 94 ntBASIC5.51□□□□□ -1.53
ATF4P18848 RNA5SP223-201ENST00000365174 120 ntBASIC5.51□□□□□ -1.53
ATF4P18848 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
ATF4P18848 Y_RNA.409-201ENST00000383990 98 ntBASIC5.51□□□□□ -1.53
ATF4P18848 RNU6-114P-201ENST00000384704 105 ntBASIC5.51□□□□□ -1.53
ATF4P18848 RNU6-821P-201ENST00000390995 107 ntBASIC5.51□□□□□ -1.53
ATF4P18848 RPL23AP17-201ENST00000401064 499 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AL355862.1-201ENST00000412705 353 ntBASIC5.51□□□□□ -1.53
ATF4P18848 RPSAP35-201ENST00000413753 818 ntBASIC5.51□□□□□ -1.53
ATF4P18848 GNG5P5-201ENST00000420444 220 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.51□□□□□ -1.53
ATF4P18848 AC073900.1-201ENST00000429766 776 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.51□□□□□ -1.53
ATF4P18848 ELOCP18-201ENST00000434209 337 ntBASIC5.51□□□□□ -1.53
ATF4P18848 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC5.51□□□□□ -1.53
ATF4P18848 MTCO3P18-201ENST00000440206 761 ntBASIC5.51□□□□□ -1.53
ATF4P18848 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.51□□□□□ -1.53
ATF4P18848 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 RPS7P3-201ENST00000443360 580 ntBASIC5.51□□□□□ -1.53
ATF4P18848 SDHCP3-201ENST00000445371 506 ntBASIC5.51□□□□□ -1.53
ATF4P18848 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.51□□□□□ -1.53
ATF4P18848 NFU1P2-201ENST00000448700 469 ntBASIC5.51□□□□□ -1.53
ATF4P18848 PRDX1P1-201ENST00000449329 596 ntBASIC5.51□□□□□ -1.53
ATF4P18848 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.51□□□□□ -1.53
ATF4P18848 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.51□□□□□ -1.53
ATF4P18848 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.51□□□□□ -1.53
ATF4P18848 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.51□□□□□ -1.53
ATF4P18848 RN7SL284P-201ENST00000498823 275 ntBASIC5.51□□□□□ -1.53
ATF4P18848 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.51□□□□□ -1.53
ATF4P18848 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.51□□□□□ -1.53
ATF4P18848 AC016559.1-201ENST00000511420 199 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.51□□□□□ -1.53
ATF4P18848 AC117383.2-201ENST00000514722 322 ntBASIC5.51□□□□□ -1.53
ATF4P18848 FTH1P11-201ENST00000517577 551 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.51□□□□□ -1.53
ATF4P18848 AL049869.4-201ENST00000555669 178 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AL132640.2-202ENST00000559732 614 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.51□□□□□ -1.53
ATF4P18848 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.51□□□□□ -1.53
ATF4P18848 AC023827.2-201ENST00000566880 1061 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AC025678.1-201ENST00000567861 338 ntBASIC5.51□□□□□ -1.53
ATF4P18848 SNORA70D-201ENST00000578836 135 ntBASIC5.51□□□□□ -1.53
ATF4P18848 UBE2L4-201ENST00000587688 464 ntBASIC5.51□□□□□ -1.53
ATF4P18848 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.51□□□□□ -1.53
ATF4P18848 AP001823.1-201ENST00000604056 1003 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AC112230.1-201ENST00000604342 547 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AC008385.1-201ENST00000604421 355 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AC023206.1-201ENST00000605824 298 ntBASIC5.51□□□□□ -1.53
ATF4P18848 OR6R2P-201ENST00000609216 300 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC5.51□□□□□ -1.53
ATF4P18848 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 AC002553.4-201ENST00000616896 331 ntBASIC5.51□□□□□ -1.53
ATF4P18848 U73479.1-201ENST00000618062 168 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AL158801.5-201ENST00000623123 465 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AC138965.3-201ENST00000623875 498 ntBASIC5.51□□□□□ -1.53
ATF4P18848 AP000843.1-201ENST00000624880 701 ntBASIC5.51□□□□□ -1.53
ATF4P18848 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
ATF4P18848 AL157713.1-201ENST00000379752 1531 ntBASIC5.51□□□□□ -1.53
ATF4P18848 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 AL359976.1-201ENST00000418655 3528 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms