Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ZNF833P-201ENST00000424938 1494 ntBASIC6.53□□□□□ -1.36
TOP2AP11388 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TOP2AP11388 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
TOP2AP11388 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TOP2AP11388 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TOP2AP11388 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TOP2AP11388 SNORA11.2-201ENST00000408318 127 ntBASIC6.53□□□□□ -1.36
TOP2AP11388 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.53□□□□□ -1.36
TOP2AP11388 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.53□□□□□ -1.36
TOP2AP11388 AL353748.1-201ENST00000440753 474 ntBASIC6.53□□□□□ -1.36
TOP2AP11388 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC6.53□□□□□ -1.36
TOP2AP11388 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.53□□□□□ -1.36
TOP2AP11388 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.53□□□□□ -1.36
TOP2AP11388 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.53□□□□□ -1.36
TOP2AP11388 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.53□□□□□ -1.36
TOP2AP11388 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TOP2AP11388 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC6.53□□□□□ -1.36
TOP2AP11388 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TOP2AP11388 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TOP2AP11388 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
TOP2AP11388 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
TOP2AP11388 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
TOP2AP11388 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TOP2AP11388 AC010740.1-201ENST00000417035 684 ntBASIC6.52□□□□□ -1.37
TOP2AP11388 AC017083.1-201ENST00000428093 483 ntBASIC6.52□□□□□ -1.37
TOP2AP11388 EIF4A1P11-201ENST00000451239 222 ntBASIC6.52□□□□□ -1.37
TOP2AP11388 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.52□□□□□ -1.37
TOP2AP11388 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC6.52□□□□□ -1.37
TOP2AP11388 PPBPP1-201ENST00000510807 373 ntBASIC6.52□□□□□ -1.37
TOP2AP11388 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.52□□□□□ -1.37
TOP2AP11388 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.52□□□□□ -1.37
TOP2AP11388 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.52□□□□□ -1.37
TOP2AP11388 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.52□□□□□ -1.37
TOP2AP11388 AC012493.2-201ENST00000595083 291 ntBASIC6.52□□□□□ -1.37
TOP2AP11388 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
TOP2AP11388 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TOP2AP11388 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.52□□□□□ -1.37
TOP2AP11388 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TOP2AP11388 CDY11P-201ENST00000447168 1651 ntBASIC6.52□□□□□ -1.37
TOP2AP11388 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC6.51□□□□□ -1.37
TOP2AP11388 HSFY1P1-201ENST00000423928 1178 ntBASIC6.51□□□□□ -1.37
TOP2AP11388 AC073063.1-201ENST00000434352 607 ntBASIC6.51□□□□□ -1.37
TOP2AP11388 AC005019.1-201ENST00000436455 431 ntBASIC6.51□□□□□ -1.37
TOP2AP11388 VN1R25P-201ENST00000443385 738 ntBASIC6.51□□□□□ -1.37
TOP2AP11388 VN1R40P-201ENST00000455196 941 ntBASIC6.51□□□□□ -1.37
TOP2AP11388 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.51□□□□□ -1.37
TOP2AP11388 GMPSP1-201ENST00000514075 579 ntBASIC6.51□□□□□ -1.37
TOP2AP11388 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6.51□□□□□ -1.37
TOP2AP11388 AC103843.2-201ENST00000530523 682 ntBASIC6.51□□□□□ -1.37
TOP2AP11388 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.51□□□□□ -1.37
TOP2AP11388 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.51□□□□□ -1.37
TOP2AP11388 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.51□□□□□ -1.37
TOP2AP11388 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.51□□□□□ -1.37
TOP2AP11388 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TOP2AP11388 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.51□□□□□ -1.37
TOP2AP11388 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TOP2AP11388 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TOP2AP11388 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TOP2AP11388 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.51□□□□□ -1.37
TOP2AP11388 NCOA4P2-201ENST00000340589 1813 ntBASIC6.51□□□□□ -1.37
TOP2AP11388 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC6.51□□□□□ -1.37
TOP2AP11388 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.51□□□□□ -1.37
TOP2AP11388 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.51□□□□□ -1.37
TOP2AP11388 RNA5SP424-201ENST00000390988 115 ntBASIC6.5□□□□□ -1.37
TOP2AP11388 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC6.5□□□□□ -1.37
TOP2AP11388 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TOP2AP11388 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.5□□□□□ -1.37
TOP2AP11388 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.5□□□□□ -1.37
TOP2AP11388 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.5□□□□□ -1.37
TOP2AP11388 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.5□□□□□ -1.37
TOP2AP11388 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.5□□□□□ -1.37
TOP2AP11388 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TOP2AP11388 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TOP2AP11388 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TOP2AP11388 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TOP2AP11388 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TOP2AP11388 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TOP2AP11388 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
TOP2AP11388 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
TOP2AP11388 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TOP2AP11388 IL6STP1-201ENST00000346911 1020 ntBASIC6.5□□□□□ -1.37
TOP2AP11388 AL139039.2-201ENST00000407436 479 ntBASIC6.5□□□□□ -1.37
TOP2AP11388 AC096644.3-201ENST00000416788 338 ntBASIC6.5□□□□□ -1.37
TOP2AP11388 CYCSP35-201ENST00000451978 304 ntBASIC6.5□□□□□ -1.37
TOP2AP11388 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
TOP2AP11388 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.5□□□□□ -1.37
TOP2AP11388 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.5□□□□□ -1.37
TOP2AP11388 UBTFL9-201ENST00000534504 1148 ntBASIC6.5□□□□□ -1.37
TOP2AP11388 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.5□□□□□ -1.37
TOP2AP11388 IGKV2OR2-8-201ENST00000558710 300 ntBASIC6.5□□□□□ -1.37
TOP2AP11388 RPL21P12-201ENST00000559810 515 ntBASIC6.5□□□□□ -1.37
TOP2AP11388 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.5□□□□□ -1.37
TOP2AP11388 AC006077.1-201ENST00000604746 343 ntBASIC6.5□□□□□ -1.37
TOP2AP11388 AL121890.2-201ENST00000617644 465 ntBASIC6.5□□□□□ -1.37
TOP2AP11388 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
TOP2AP11388 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TOP2AP11388 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TOP2AP11388 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TOP2AP11388 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TOP2AP11388 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms