Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.54□□□□□ -1.84
CD74P04233 AC020915.5-201ENST00000596836 964 ntBASIC3.54□□□□□ -1.84
CD74P04233 BMS1P7-201ENST00000602440 1052 ntBASIC3.54□□□□□ -1.84
CD74P04233 AC110741.2-201ENST00000605278 268 ntBASIC3.54□□□□□ -1.84
CD74P04233 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.54□□□□□ -1.84
CD74P04233 AL133243.1-201ENST00000614487 366 ntBASIC3.54□□□□□ -1.84
CD74P04233 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.54□□□□□ -1.84
CD74P04233 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.54□□□□□ -1.84
CD74P04233 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CD74P04233 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.53□□□□□ -1.84
CD74P04233 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.53□□□□□ -1.84
CD74P04233 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CD74P04233 SDAD1P1-202ENST00000524156 2051 ntBASIC3.53□□□□□ -1.84
CD74P04233 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CD74P04233 MAPK10-373ENST00000641983 6772 ntBASIC3.53□□□□□ -1.84
CD74P04233 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CD74P04233 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CD74P04233 AC007685.1-201ENST00000329806 452 ntBASIC3.53□□□□□ -1.84
CD74P04233 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CD74P04233 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CD74P04233 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.53□□□□□ -1.84
CD74P04233 Y_RNA.625-201ENST00000411256 107 ntBASIC3.53□□□□□ -1.84
CD74P04233 RHEBP3-201ENST00000411920 351 ntBASIC3.53□□□□□ -1.84
CD74P04233 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.53□□□□□ -1.84
CD74P04233 RPL30P3-201ENST00000424262 333 ntBASIC3.53□□□□□ -1.84
CD74P04233 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.53□□□□□ -1.84
CD74P04233 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.53□□□□□ -1.84
CD74P04233 USP9YP9-201ENST00000429406 715 ntBASIC3.53□□□□□ -1.84
CD74P04233 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.53□□□□□ -1.84
CD74P04233 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.53□□□□□ -1.84
CD74P04233 BUD31P2-201ENST00000449374 300 ntBASIC3.53□□□□□ -1.84
CD74P04233 FABP3P2-201ENST00000453169 399 ntBASIC3.53□□□□□ -1.84
CD74P04233 RPL23AP81-201ENST00000455252 467 ntBASIC3.53□□□□□ -1.84
CD74P04233 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.53□□□□□ -1.84
CD74P04233 AC105233.1-201ENST00000498840 781 ntBASIC3.53□□□□□ -1.84
CD74P04233 HPRT1P2-201ENST00000505250 544 ntBASIC3.53□□□□□ -1.84
CD74P04233 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
CD74P04233 BTF3L4P4-201ENST00000506381 449 ntBASIC3.53□□□□□ -1.84
CD74P04233 AC092593.2-201ENST00000513866 913 ntBASIC3.53□□□□□ -1.84
CD74P04233 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.53□□□□□ -1.84
CD74P04233 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.53□□□□□ -1.84
CD74P04233 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.53□□□□□ -1.84
CD74P04233 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.53□□□□□ -1.84
CD74P04233 CR383656.6-201ENST00000550518 394 ntBASIC3.53□□□□□ -1.84
CD74P04233 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.53□□□□□ -1.84
CD74P04233 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.53□□□□□ -1.84
CD74P04233 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.53□□□□□ -1.84
CD74P04233 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.53□□□□□ -1.84
CD74P04233 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
CD74P04233 AC011477.5-201ENST00000586571 259 ntBASIC3.53□□□□□ -1.84
CD74P04233 AC010857.1-201ENST00000606398 594 ntBASIC3.53□□□□□ -1.84
CD74P04233 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CD74P04233 AL713922.2-201ENST00000619384 716 ntBASIC3.53□□□□□ -1.84
CD74P04233 AL049536.1-201ENST00000625043 744 ntBASIC3.53□□□□□ -1.84
CD74P04233 AC119674.1-212ENST00000641155 993 ntBASIC3.53□□□□□ -1.84
CD74P04233 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CD74P04233 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
CD74P04233 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CD74P04233 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CD74P04233 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CD74P04233 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CD74P04233 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CD74P04233 A2MP1-204ENST00000566278 4130 ntBASIC3.52□□□□□ -1.85
CD74P04233 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CD74P04233 AC008033.1-201ENST00000216407 1162 ntBASIC3.52□□□□□ -1.85
CD74P04233 U3.15-201ENST00000365398 212 ntBASIC3.52□□□□□ -1.85
CD74P04233 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CD74P04233 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CD74P04233 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CD74P04233 Z98941.1-201ENST00000407764 100 ntBASIC3.52□□□□□ -1.85
CD74P04233 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.52□□□□□ -1.85
CD74P04233 PGBD4P8-201ENST00000412993 562 ntBASIC3.52□□□□□ -1.85
CD74P04233 AC244453.4-201ENST00000419150 388 ntBASIC3.52□□□□□ -1.85
CD74P04233 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.52□□□□□ -1.85
CD74P04233 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.52□□□□□ -1.85
CD74P04233 IFNNP1-201ENST00000429219 553 ntBASIC3.52□□□□□ -1.85
CD74P04233 AL365396.1-201ENST00000430854 671 ntBASIC3.52□□□□□ -1.85
CD74P04233 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.52□□□□□ -1.85
CD74P04233 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.52□□□□□ -1.85
CD74P04233 AC096638.2-201ENST00000434965 711 ntBASIC3.52□□□□□ -1.85
CD74P04233 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.52□□□□□ -1.85
CD74P04233 AC011005.3-201ENST00000491624 395 ntBASIC3.52□□□□□ -1.85
CD74P04233 AC010374.1-201ENST00000503762 1237 ntBASIC3.52□□□□□ -1.85
CD74P04233 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.52□□□□□ -1.85
CD74P04233 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CD74P04233 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CD74P04233 AC063949.1-201ENST00000552900 865 ntBASIC3.52□□□□□ -1.85
CD74P04233 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.52□□□□□ -1.85
CD74P04233 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.52□□□□□ -1.85
CD74P04233 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.52□□□□□ -1.85
CD74P04233 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.52□□□□□ -1.85
CD74P04233 AC079171.1-201ENST00000568788 914 ntBASIC3.52□□□□□ -1.85
CD74P04233 MIR4737-201ENST00000583979 81 ntBASIC3.52□□□□□ -1.85
CD74P04233 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.52□□□□□ -1.85
CD74P04233 AL354984.3-201ENST00000604803 325 ntBASIC3.52□□□□□ -1.85
CD74P04233 AC025175.1-201ENST00000606482 759 ntBASIC3.52□□□□□ -1.85
CD74P04233 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.52□□□□□ -1.85
CD74P04233 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.52□□□□□ -1.85
CD74P04233 AC016957.2-201ENST00000616998 848 ntBASIC3.52□□□□□ -1.85
CD74P04233 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms