Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 IGKV2D-23-201ENST00000518179 286 ntBASIC4.26□□□□□ -1.73
APOEP02649 AC107016.1-201ENST00000550463 337 ntBASIC4.26□□□□□ -1.73
APOEP02649 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.26□□□□□ -1.73
APOEP02649 CBX3P5-201ENST00000552017 521 ntBASIC4.26□□□□□ -1.73
APOEP02649 AC007224.1-201ENST00000564410 144 ntBASIC4.26□□□□□ -1.73
APOEP02649 RPL23AP87-202ENST00000573039 466 ntBASIC4.26□□□□□ -1.73
APOEP02649 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.26□□□□□ -1.73
APOEP02649 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.26□□□□□ -1.73
APOEP02649 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.26□□□□□ -1.73
APOEP02649 AC110741.2-201ENST00000605278 268 ntBASIC4.26□□□□□ -1.73
APOEP02649 AC090246.1-201ENST00000616499 426 ntBASIC4.26□□□□□ -1.73
APOEP02649 MIR7151-201ENST00000617477 60 ntBASIC4.26□□□□□ -1.73
APOEP02649 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.26□□□□□ -1.73
APOEP02649 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOEP02649 AL356317.1-201ENST00000396110 1436 ntBASIC4.26□□□□□ -1.73
APOEP02649 MAPK10-253ENST00000641010 4072 ntBASIC4.26□□□□□ -1.73
APOEP02649 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOEP02649 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
APOEP02649 AC026951.1-201ENST00000559530 2459 ntBASIC4.26□□□□□ -1.73
APOEP02649 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOEP02649 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
APOEP02649 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
APOEP02649 AC106871.1-201ENST00000568324 3102 ntBASIC4.25□□□□□ -1.73
APOEP02649 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
APOEP02649 SPRR2C-201ENST00000290702 219 ntBASIC4.25□□□□□ -1.73
APOEP02649 SNORD35B-201ENST00000363660 87 ntBASIC4.25□□□□□ -1.73
APOEP02649 RNU1-13P-201ENST00000384499 162 ntBASIC4.25□□□□□ -1.73
APOEP02649 SNORA37-201ENST00000384504 129 ntBASIC4.25□□□□□ -1.73
APOEP02649 ZNF603P-201ENST00000405613 487 ntBASIC4.25□□□□□ -1.73
APOEP02649 PGBD4P8-201ENST00000412993 562 ntBASIC4.25□□□□□ -1.73
APOEP02649 TPT1P2-201ENST00000413105 503 ntBASIC4.25□□□□□ -1.73
APOEP02649 AL356095.1-201ENST00000417217 199 ntBASIC4.25□□□□□ -1.73
APOEP02649 OR5BE1P-201ENST00000425977 939 ntBASIC4.25□□□□□ -1.73
APOEP02649 AL158073.1-201ENST00000426848 1104 ntBASIC4.25□□□□□ -1.73
APOEP02649 RPS20P1-201ENST00000434853 354 ntBASIC4.25□□□□□ -1.73
APOEP02649 GSTA7P-201ENST00000438425 448 ntBASIC4.25□□□□□ -1.73
APOEP02649 RPS4XP4-201ENST00000443195 763 ntBASIC4.25□□□□□ -1.73
APOEP02649 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.25□□□□□ -1.73
APOEP02649 HSFY6P-201ENST00000445573 403 ntBASIC4.25□□□□□ -1.73
APOEP02649 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.25□□□□□ -1.73
APOEP02649 EIF4A1P11-201ENST00000451239 222 ntBASIC4.25□□□□□ -1.73
APOEP02649 NUTF2P7-201ENST00000453086 375 ntBASIC4.25□□□□□ -1.73
APOEP02649 SYT14P1-201ENST00000481459 721 ntBASIC4.25□□□□□ -1.73
APOEP02649 AC092045.1-201ENST00000495716 1231 ntBASIC4.25□□□□□ -1.73
APOEP02649 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.25□□□□□ -1.73
APOEP02649 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
APOEP02649 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.25□□□□□ -1.73
APOEP02649 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.25□□□□□ -1.73
APOEP02649 AGGF1P6-201ENST00000569213 976 ntBASIC4.25□□□□□ -1.73
APOEP02649 HNRNPCP4-201ENST00000571636 900 ntBASIC4.25□□□□□ -1.73
APOEP02649 AC025627.2-201ENST00000576220 160 ntBASIC4.25□□□□□ -1.73
APOEP02649 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.25□□□□□ -1.73
APOEP02649 AC020914.4-201ENST00000597690 277 ntBASIC4.25□□□□□ -1.73
APOEP02649 AC004241.3-201ENST00000611728 517 ntBASIC4.25□□□□□ -1.73
APOEP02649 AC233309.1-201ENST00000619522 751 ntBASIC4.25□□□□□ -1.73
APOEP02649 OR5BE1P-202ENST00000641168 1176 ntBASIC4.25□□□□□ -1.73
APOEP02649 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
APOEP02649 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
APOEP02649 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
APOEP02649 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
APOEP02649 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.25□□□□□ -1.73
APOEP02649 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.25□□□□□ -1.73
APOEP02649 AL451142.2-201ENST00000429076 2090 ntBASIC4.25□□□□□ -1.73
APOEP02649 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.24□□□□□ -1.73
APOEP02649 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOEP02649 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
APOEP02649 RPL21P65-201ENST00000406094 466 ntBASIC4.24□□□□□ -1.73
APOEP02649 RNA5SP239-201ENST00000410218 129 ntBASIC4.24□□□□□ -1.73
APOEP02649 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.24□□□□□ -1.73
APOEP02649 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.24□□□□□ -1.73
APOEP02649 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.24□□□□□ -1.73
APOEP02649 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.24□□□□□ -1.73
APOEP02649 AC099063.2-201ENST00000446360 662 ntBASIC4.24□□□□□ -1.73
APOEP02649 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.24□□□□□ -1.73
APOEP02649 AC243772.1-201ENST00000451620 410 ntBASIC4.24□□□□□ -1.73
APOEP02649 AL645939.1-201ENST00000453429 797 ntBASIC4.24□□□□□ -1.73
APOEP02649 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.24□□□□□ -1.73
APOEP02649 AC020593.1-201ENST00000507399 299 ntBASIC4.24□□□□□ -1.73
APOEP02649 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.24□□□□□ -1.73
APOEP02649 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.24□□□□□ -1.73
APOEP02649 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOEP02649 MIR2114-201ENST00000516645 80 ntBASIC4.24□□□□□ -1.73
APOEP02649 RNU7-143P-201ENST00000516781 65 ntBASIC4.24□□□□□ -1.73
APOEP02649 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.24□□□□□ -1.73
APOEP02649 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.24□□□□□ -1.73
APOEP02649 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.24□□□□□ -1.73
APOEP02649 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
APOEP02649 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.24□□□□□ -1.73
APOEP02649 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.24□□□□□ -1.73
APOEP02649 AC012417.1-201ENST00000582307 1039 ntBASIC4.24□□□□□ -1.73
APOEP02649 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.24□□□□□ -1.73
APOEP02649 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.24□□□□□ -1.73
APOEP02649 MIR6867-201ENST00000610636 67 ntBASIC4.24□□□□□ -1.73
APOEP02649 AC103858.2-201ENST00000621471 543 ntBASIC4.24□□□□□ -1.73
APOEP02649 AC068724.3-201ENST00000625906 87 ntBASIC4.24□□□□□ -1.73
APOEP02649 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOEP02649 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOEP02649 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOEP02649 AC083899.2-201ENST00000423285 1376 ntBASIC4.24□□□□□ -1.73
APOEP02649 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms