Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZNF192P1-203ENST00000565888 810 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.2□□□□□ -1.9
IFNA1P01562 RPL23AP87-202ENST00000573039 466 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.2□□□□□ -1.9
IFNA1P01562 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
IFNA1P01562 AL121612.2-201ENST00000612261 482 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AL592295.2-201ENST00000612578 206 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AC243654.2-201ENST00000612843 443 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.2□□□□□ -1.9
IFNA1P01562 AC090246.1-201ENST00000616499 426 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 MIR6778-201ENST00000617912 73 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AC091905.1-201ENST00000624400 311 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 AC116563.2-201ENST00000624751 535 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
IFNA1P01562 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.2□□□□□ -1.9
IFNA1P01562 AC096656.1-201ENST00000623826 1364 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.2□□□□□ -1.9
IFNA1P01562 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IFNA1P01562 AL353746.1-201ENST00000566293 6881 ntBASIC3.2□□□□□ -1.9
IFNA1P01562 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
IFNA1P01562 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IFNA1P01562 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IFNA1P01562 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IFNA1P01562 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
IFNA1P01562 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IFNA1P01562 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
IFNA1P01562 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
IFNA1P01562 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
IFNA1P01562 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IFNA1P01562 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IFNA1P01562 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
IFNA1P01562 RPL37P18-201ENST00000411602 243 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AC013404.1-201ENST00000413068 249 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.19□□□□□ -1.9
IFNA1P01562 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
IFNA1P01562 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.19□□□□□ -1.9
IFNA1P01562 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.19□□□□□ -1.9
IFNA1P01562 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.19□□□□□ -1.9
IFNA1P01562 AL359265.2-201ENST00000434367 631 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 SKP1P1-201ENST00000438081 489 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AL353898.1-201ENST00000444055 238 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.19□□□□□ -1.9
IFNA1P01562 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.19□□□□□ -1.9
IFNA1P01562 HMGN2P21-201ENST00000447764 270 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 TRY2P-201ENST00000448860 689 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AL162591.2-201ENST00000449634 317 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC3.19□□□□□ -1.9
IFNA1P01562 AC053481.1-201ENST00000467217 306 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.19□□□□□ -1.9
IFNA1P01562 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.19□□□□□ -1.9
IFNA1P01562 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.19□□□□□ -1.9
IFNA1P01562 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
IFNA1P01562 AP004242.1-201ENST00000533701 349 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.19□□□□□ -1.9
IFNA1P01562 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.19□□□□□ -1.9
IFNA1P01562 BGLT3-201ENST00000564523 994 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.19□□□□□ -1.9
IFNA1P01562 MIR3691-201ENST00000578066 90 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AC022884.3-201ENST00000579571 248 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 MIR3667-201ENST00000581025 74 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AP001160.4-201ENST00000596971 382 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AC073091.2-201ENST00000603205 907 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AL133247.2-201ENST00000603236 482 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AC098935.2-201ENST00000604222 466 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AL592436.1-201ENST00000605135 558 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AC012213.4-201ENST00000606457 354 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 SNORA35B-201ENST00000607417 129 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
IFNA1P01562 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.19□□□□□ -1.9
IFNA1P01562 MIR1910-201ENST00000636955 80 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 MIR7153-201ENST00000637758 57 ntBASIC3.19□□□□□ -1.9
IFNA1P01562 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.19□□□□□ -1.9
IFNA1P01562 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
IFNA1P01562 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.19□□□□□ -1.9
IFNA1P01562 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
IFNA1P01562 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
IFNA1P01562 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IFNA1P01562 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
IFNA1P01562 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
IFNA1P01562 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.18□□□□□ -1.9
IFNA1P01562 OTUD4P1-201ENST00000237841 3067 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
IFNA1P01562 AL590240.1-201ENST00000334118 313 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.18□□□□□ -1.9
IFNA1P01562 SNORD35B-201ENST00000363660 87 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.18□□□□□ -1.9
IFNA1P01562 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.18□□□□□ -1.9
IFNA1P01562 MIR621-201ENST00000384919 96 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.18□□□□□ -1.9
IFNA1P01562 RNA5SP113-201ENST00000410486 84 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AC069218.2-201ENST00000411665 344 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 NFYAP1-201ENST00000431953 972 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.18□□□□□ -1.9
IFNA1P01562 ACTR3P2-201ENST00000439585 1257 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.18□□□□□ -1.9
IFNA1P01562 CNOT7P2-201ENST00000441051 832 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 RPS7P5-201ENST00000441482 581 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AC073850.1-201ENST00000449243 255 ntBASIC3.18□□□□□ -1.9
IFNA1P01562 AC098824.1-201ENST00000453565 980 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms