Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.51□□□□□ -1.69
PDGFBP01127 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.51□□□□□ -1.69
PDGFBP01127 MTND2P8-201ENST00000450555 1025 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 ISCUP1-201ENST00000454451 448 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 EIF2S2P5-201ENST00000457635 968 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 SYT14P1-201ENST00000481459 721 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 AC104687.1-201ENST00000485829 412 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.51□□□□□ -1.69
PDGFBP01127 SNORA74D-201ENST00000516404 141 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.51□□□□□ -1.69
PDGFBP01127 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.51□□□□□ -1.69
PDGFBP01127 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.51□□□□□ -1.69
PDGFBP01127 NF1P5-201ENST00000588287 448 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.51□□□□□ -1.69
PDGFBP01127 AL161729.3-201ENST00000603533 673 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 RNU4-89P-201ENST00000607443 133 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 AP003072.4-201ENST00000624580 310 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFBP01127 GTF2H2B-203ENST00000508065 1432 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.51□□□□□ -1.69
PDGFBP01127 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFBP01127 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.51□□□□□ -1.69
PDGFBP01127 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PDGFBP01127 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFBP01127 AC009501.3-201ENST00000605001 1352 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFBP01127 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFBP01127 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PDGFBP01127 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFBP01127 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFBP01127 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFBP01127 AC092162.3-201ENST00000624511 1624 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFBP01127 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.5□□□□□ -1.69
PDGFBP01127 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFBP01127 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PDGFBP01127 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFBP01127 SNORD51.1-201ENST00000365405 77 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 AL356057.1-202ENST00000402263 756 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.5□□□□□ -1.69
PDGFBP01127 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFBP01127 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFBP01127 OR8F1P-201ENST00000425243 930 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 FAR1P1-201ENST00000427163 934 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 MTATP6P11-201ENST00000428071 670 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 MRPL50P1-201ENST00000431951 384 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PDGFBP01127 AL035246.1-201ENST00000433554 1255 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFBP01127 RPS3AP12-201ENST00000443616 753 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
PDGFBP01127 PRPF38AP1-201ENST00000451976 933 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFBP01127 RPS27AP17-201ENST00000463344 455 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 AC093663.2-201ENST00000484625 313 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFBP01127 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFBP01127 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFBP01127 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PDGFBP01127 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFBP01127 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.5□□□□□ -1.69
PDGFBP01127 AC090819.1-201ENST00000523800 1111 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 AC093014.1-201ENST00000548926 724 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFBP01127 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFBP01127 AC027176.2-201ENST00000559166 746 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 HMGB3P26-201ENST00000560051 582 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 HSPE1P5-201ENST00000561489 272 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 MIR4472-2-201ENST00000582069 67 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 RN7SL435P-201ENST00000584418 282 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFBP01127 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.5□□□□□ -1.69
PDGFBP01127 ZNF92P3-201ENST00000596594 954 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 SRGNP1-201ENST00000603392 451 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 AC112230.1-201ENST00000604342 547 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 AL451086.1-201ENST00000605596 223 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFBP01127 AL357559.1-201ENST00000622228 274 ntBASIC4.5□□□□□ -1.69
PDGFBP01127 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.5□□□□□ -1.69
PDGFBP01127 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFBP01127 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFBP01127 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFBP01127 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFBP01127 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFBP01127 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFBP01127 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFBP01127 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFBP01127 AC074029.4-201ENST00000624796 1859 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PDGFBP01127 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PDGFBP01127 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFBP01127 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.49□□□□□ -1.69
PDGFBP01127 AL133268.1-201ENST00000405676 1401 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.49□□□□□ -1.69
PDGFBP01127 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFBP01127 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
PDGFBP01127 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFBP01127 MIR7-3-201ENST00000384898 110 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms