Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
SEMA3DO95025 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.98□□□□□ -1.77
SEMA3DO95025 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEMA3DO95025 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEMA3DO95025 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEMA3DO95025 AC009480.2-201ENST00000422916 432 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.98□□□□□ -1.77
SEMA3DO95025 GSTA7P-201ENST00000438425 448 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 PPIAP17-201ENST00000438507 471 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEMA3DO95025 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.98□□□□□ -1.77
SEMA3DO95025 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.98□□□□□ -1.77
SEMA3DO95025 FABP3P2-201ENST00000453169 399 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.98□□□□□ -1.77
SEMA3DO95025 AC068305.1-201ENST00000497406 726 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.98□□□□□ -1.77
SEMA3DO95025 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SEMA3DO95025 AC099522.1-202ENST00000514718 367 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.98□□□□□ -1.77
SEMA3DO95025 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.98□□□□□ -1.77
SEMA3DO95025 MIR4512-201ENST00000583257 77 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.98□□□□□ -1.77
SEMA3DO95025 VN1R84P-201ENST00000593697 235 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 AC007423.1-201ENST00000605009 627 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 AC012603.1-201ENST00000606424 528 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.98□□□□□ -1.77
SEMA3DO95025 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.98□□□□□ -1.77
SEMA3DO95025 ERCC6-202ENST00000374127 1782 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.98□□□□□ -1.77
SEMA3DO95025 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
SEMA3DO95025 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEMA3DO95025 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEMA3DO95025 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEMA3DO95025 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEMA3DO95025 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.97□□□□□ -1.77
SEMA3DO95025 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
SEMA3DO95025 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SEMA3DO95025 MAPK10-372ENST00000641954 3413 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
SEMA3DO95025 RNU6-225P-201ENST00000384613 103 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 U3.22-201ENST00000391120 215 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 AP000357.1-201ENST00000409926 1165 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 AC073464.3-201ENST00000422564 712 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 CEACAMP9-201ENST00000442990 513 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SEMA3DO95025 AC109327.1-201ENST00000471666 403 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 AC041039.1-201ENST00000485656 536 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.97□□□□□ -1.77
SEMA3DO95025 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.97□□□□□ -1.77
SEMA3DO95025 IGKV2D-23-201ENST00000518179 286 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 AC009643.1-201ENST00000532030 391 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.97□□□□□ -1.77
SEMA3DO95025 TVP23BP1-201ENST00000557500 617 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.97□□□□□ -1.77
SEMA3DO95025 MIR4644-201ENST00000579929 84 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 AC015911.5-201ENST00000587076 451 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 AL096803.3-201ENST00000609032 532 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 AC117490.2-201ENST00000610042 594 ntBASIC3.97□□□□□ -1.77
SEMA3DO95025 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEMA3DO95025 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SEMA3DO95025 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEMA3DO95025 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SEMA3DO95025 AL356317.1-201ENST00000396110 1436 ntBASIC3.96□□□□□ -1.77
SEMA3DO95025 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
SEMA3DO95025 AC110792.3-201ENST00000595906 1614 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SEMA3DO95025 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SEMA3DO95025 RNU6-304P-201ENST00000364855 107 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.96□□□□□ -1.78
SEMA3DO95025 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SEMA3DO95025 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.96□□□□□ -1.78
SEMA3DO95025 AL161909.1-201ENST00000397390 712 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.96□□□□□ -1.78
SEMA3DO95025 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.96□□□□□ -1.78
SEMA3DO95025 AL592293.2-201ENST00000422292 996 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 AC234779.1-201ENST00000425910 285 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SEMA3DO95025 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.96□□□□□ -1.78
SEMA3DO95025 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.96□□□□□ -1.78
SEMA3DO95025 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.96□□□□□ -1.78
SEMA3DO95025 AC022336.1-201ENST00000475510 337 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 AC025554.1-201ENST00000505641 188 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.96□□□□□ -1.78
SEMA3DO95025 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SEMA3DO95025 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SEMA3DO95025 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.96□□□□□ -1.78
SEMA3DO95025 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.96□□□□□ -1.78
SEMA3DO95025 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.96□□□□□ -1.78
SEMA3DO95025 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.96□□□□□ -1.78
SEMA3DO95025 AC022655.2-201ENST00000577280 318 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 MIR4277-201ENST00000578298 84 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 MIR4458-201ENST00000578872 75 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.96□□□□□ -1.78
SEMA3DO95025 FAM60CP-201ENST00000591086 664 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 AC008745.1-201ENST00000604064 271 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 AC110741.2-201ENST00000605278 268 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SEMA3DO95025 AC015722.2-201ENST00000622210 551 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 AC004943.3-201ENST00000624116 600 ntBASIC3.96□□□□□ -1.78
SEMA3DO95025 MIR3653-201ENST00000625572 110 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms