Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 Z95152.1-201ENST00000453556 656 ntBASIC4.3□□□□□ -1.72
SNX3O60493 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX3O60493 AC026348.1-201ENST00000462549 1053 ntBASIC4.3□□□□□ -1.72
SNX3O60493 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX3O60493 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX3O60493 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX3O60493 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX3O60493 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX3O60493 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX3O60493 AC004980.4-201ENST00000513375 203 ntBASIC4.3□□□□□ -1.72
SNX3O60493 RNA5SP497-201ENST00000516081 97 ntBASIC4.3□□□□□ -1.72
SNX3O60493 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.3□□□□□ -1.72
SNX3O60493 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX3O60493 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SNX3O60493 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX3O60493 AC095057.3-201ENST00000567102 1157 ntBASIC4.3□□□□□ -1.72
SNX3O60493 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX3O60493 MIR3614-201ENST00000581261 86 ntBASIC4.3□□□□□ -1.72
SNX3O60493 AP003117.1-201ENST00000602771 554 ntBASIC4.3□□□□□ -1.72
SNX3O60493 AP002906.1-201ENST00000603405 233 ntBASIC4.3□□□□□ -1.72
SNX3O60493 AC099785.1-201ENST00000605697 437 ntBASIC4.3□□□□□ -1.72
SNX3O60493 AL355816.1-201ENST00000607951 118 ntBASIC4.3□□□□□ -1.72
SNX3O60493 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX3O60493 MIR6891-201ENST00000618788 93 ntBASIC4.3□□□□□ -1.72
SNX3O60493 AC099654.8-201ENST00000637757 681 ntBASIC4.3□□□□□ -1.72
SNX3O60493 SAMMSON-226ENST00000642089 1582 ntBASIC4.3□□□□□ -1.72
SNX3O60493 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX3O60493 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
SNX3O60493 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SNX3O60493 AC107027.3-201ENST00000565095 3473 ntBASIC4.3□□□□□ -1.72
SNX3O60493 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SNX3O60493 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SNX3O60493 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.29□□□□□ -1.72
SNX3O60493 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.29□□□□□ -1.72
SNX3O60493 AC104446.1-201ENST00000613728 1321 ntBASIC4.29□□□□□ -1.72
SNX3O60493 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 AC021146.4-201ENST00000309229 279 ntBASIC4.29□□□□□ -1.72
SNX3O60493 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 RNU5B-1-201ENST00000363286 116 ntBASIC4.29□□□□□ -1.72
SNX3O60493 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.29□□□□□ -1.72
SNX3O60493 RNU6-925P-201ENST00000384629 104 ntBASIC4.29□□□□□ -1.72
SNX3O60493 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 RPL23AP48-201ENST00000406913 488 ntBASIC4.29□□□□□ -1.72
SNX3O60493 RN7SKP206-201ENST00000410823 293 ntBASIC4.29□□□□□ -1.72
SNX3O60493 AC096533.1-201ENST00000411645 353 ntBASIC4.29□□□□□ -1.72
SNX3O60493 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX3O60493 AL590609.2-201ENST00000421430 368 ntBASIC4.29□□□□□ -1.72
SNX3O60493 AC011742.1-201ENST00000431448 434 ntBASIC4.29□□□□□ -1.72
SNX3O60493 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.29□□□□□ -1.72
SNX3O60493 AC011242.1-201ENST00000433596 1158 ntBASIC4.29□□□□□ -1.72
SNX3O60493 AL049745.1-201ENST00000433953 286 ntBASIC4.29□□□□□ -1.72
SNX3O60493 AL356535.1-201ENST00000440335 398 ntBASIC4.29□□□□□ -1.72
SNX3O60493 RPS26P30-201ENST00000443431 335 ntBASIC4.29□□□□□ -1.72
SNX3O60493 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX3O60493 YWHAQP9-201ENST00000445891 512 ntBASIC4.29□□□□□ -1.72
SNX3O60493 RPL23AP43-201ENST00000446445 471 ntBASIC4.29□□□□□ -1.72
SNX3O60493 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 DNAJC19P8-201ENST00000452887 259 ntBASIC4.29□□□□□ -1.72
SNX3O60493 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.29□□□□□ -1.72
SNX3O60493 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX3O60493 BX284632.1-201ENST00000478218 541 ntBASIC4.29□□□□□ -1.72
SNX3O60493 CAB39P1-201ENST00000502277 460 ntBASIC4.29□□□□□ -1.72
SNX3O60493 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
SNX3O60493 AC090568.1-201ENST00000509499 856 ntBASIC4.29□□□□□ -1.72
SNX3O60493 AC104108.1-201ENST00000509930 412 ntBASIC4.29□□□□□ -1.72
SNX3O60493 MTATP6P1-201ENST00000514057 681 ntBASIC4.29□□□□□ -1.72
SNX3O60493 MIR2114-201ENST00000516645 80 ntBASIC4.29□□□□□ -1.72
SNX3O60493 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.29□□□□□ -1.72
SNX3O60493 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.29□□□□□ -1.72
SNX3O60493 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 AC090751.1-201ENST00000566966 267 ntBASIC4.29□□□□□ -1.72
SNX3O60493 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX3O60493 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.29□□□□□ -1.72
SNX3O60493 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.29□□□□□ -1.72
SNX3O60493 AC011458.1-201ENST00000604034 617 ntBASIC4.29□□□□□ -1.72
SNX3O60493 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.29□□□□□ -1.72
SNX3O60493 AC015982.1-201ENST00000608113 465 ntBASIC4.29□□□□□ -1.72
SNX3O60493 MIR6861-201ENST00000618657 64 ntBASIC4.29□□□□□ -1.72
SNX3O60493 AC006065.6-201ENST00000625201 545 ntBASIC4.29□□□□□ -1.72
SNX3O60493 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 AC125257.1-201ENST00000560400 2930 ntBASIC4.29□□□□□ -1.72
SNX3O60493 AL353743.4-201ENST00000422653 1547 ntBASIC4.29□□□□□ -1.72
SNX3O60493 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.29□□□□□ -1.72
SNX3O60493 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNX3O60493 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SNX3O60493 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SNX3O60493 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNX3O60493 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX3O60493 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SNX3O60493 AL645568.2-201ENST00000432815 1337 ntBASIC4.28□□□□□ -1.72
SNX3O60493 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNX3O60493 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNX3O60493 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SNX3O60493 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms