Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC008079.2-201ENST00000623543 20396 ntBASIC5.08□□□□□ -1.6
PROM1O43490 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PROM1O43490 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PROM1O43490 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PROM1O43490 AC093535.2-201ENST00000624769 2326 ntBASIC5.08□□□□□ -1.6
PROM1O43490 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AC100871.1-201ENST00000507871 1456 ntBASIC5.08□□□□□ -1.6
PROM1O43490 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.08□□□□□ -1.6
PROM1O43490 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PROM1O43490 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PROM1O43490 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PROM1O43490 MIR133B-201ENST00000362210 119 ntBASIC5.08□□□□□ -1.6
PROM1O43490 RNA5SP335-201ENST00000363817 110 ntBASIC5.08□□□□□ -1.6
PROM1O43490 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PROM1O43490 OR1L1-202ENST00000373686 1083 ntBASIC5.08□□□□□ -1.6
PROM1O43490 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PROM1O43490 Y_RNA.553-201ENST00000384670 102 ntBASIC5.08□□□□□ -1.6
PROM1O43490 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PROM1O43490 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PROM1O43490 MIR1286-201ENST00000408112 78 ntBASIC5.08□□□□□ -1.6
PROM1O43490 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PROM1O43490 RNA5SP498-201ENST00000411342 120 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.08□□□□□ -1.6
PROM1O43490 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.08□□□□□ -1.6
PROM1O43490 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 AL353597.2-202ENST00000434901 373 ntBASIC5.08□□□□□ -1.6
PROM1O43490 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.08□□□□□ -1.6
PROM1O43490 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 GAPDHP25-201ENST00000447061 1001 ntBASIC5.08□□□□□ -1.6
PROM1O43490 RPL7L1P1-201ENST00000448259 785 ntBASIC5.08□□□□□ -1.6
PROM1O43490 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.08□□□□□ -1.6
PROM1O43490 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.08□□□□□ -1.6
PROM1O43490 OR2AO1P-201ENST00000476497 403 ntBASIC5.08□□□□□ -1.6
PROM1O43490 RN7SL727P-201ENST00000482164 296 ntBASIC5.08□□□□□ -1.6
PROM1O43490 RN7SL30P-201ENST00000488416 306 ntBASIC5.08□□□□□ -1.6
PROM1O43490 RN7SL547P-201ENST00000490793 290 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 RPS24P16-201ENST00000497294 392 ntBASIC5.08□□□□□ -1.6
PROM1O43490 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 RNU6-678P-201ENST00000516832 109 ntBASIC5.08□□□□□ -1.6
PROM1O43490 MTND1P5-201ENST00000517906 940 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.08□□□□□ -1.6
PROM1O43490 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.08□□□□□ -1.6
PROM1O43490 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.08□□□□□ -1.6
PROM1O43490 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PROM1O43490 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PROM1O43490 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PROM1O43490 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 AC068714.1-201ENST00000559623 800 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 AC022146.1-201ENST00000595307 847 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.08□□□□□ -1.6
PROM1O43490 IMMP1LP3-201ENST00000604197 224 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AC009220.3-201ENST00000604318 586 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AL021997.1-201ENST00000605757 193 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AC087752.4-201ENST00000605911 462 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.08□□□□□ -1.6
PROM1O43490 AC116651.1-201ENST00000609724 556 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AC007204.2-201ENST00000615022 616 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AL590240.3-201ENST00000621416 943 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AC015908.5-201ENST00000623289 343 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AL356121.2-201ENST00000624715 780 ntBASIC5.08□□□□□ -1.6
PROM1O43490 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.08□□□□□ -1.6
PROM1O43490 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PROM1O43490 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PROM1O43490 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PROM1O43490 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PROM1O43490 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.08□□□□□ -1.6
PROM1O43490 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.08□□□□□ -1.6
PROM1O43490 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.08□□□□□ -1.6
PROM1O43490 AL137100.1-201ENST00000556703 1620 ntBASIC5.08□□□□□ -1.6
PROM1O43490 AL451142.2-201ENST00000429076 2090 ntBASIC5.08□□□□□ -1.6
PROM1O43490 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PROM1O43490 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PROM1O43490 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PROM1O43490 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PROM1O43490 AC009229.4-201ENST00000623854 1947 ntBASIC5.07□□□□□ -1.6
PROM1O43490 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PROM1O43490 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PROM1O43490 AC096656.1-201ENST00000623826 1364 ntBASIC5.07□□□□□ -1.6
PROM1O43490 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PROM1O43490 MTND5P24-201ENST00000438892 1767 ntBASIC5.07□□□□□ -1.6
PROM1O43490 MTND4P31-201ENST00000425607 1343 ntBASIC5.07□□□□□ -1.6
PROM1O43490 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 AL391994.1-201ENST00000254724 282 ntBASIC5.07□□□□□ -1.6
PROM1O43490 RNU6-1339P-201ENST00000363574 91 ntBASIC5.07□□□□□ -1.6
PROM1O43490 MIR585-201ENST00000384887 94 ntBASIC5.07□□□□□ -1.6
PROM1O43490 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.07□□□□□ -1.6
PROM1O43490 RNA5SP80-201ENST00000410475 111 ntBASIC5.07□□□□□ -1.6
PROM1O43490 RNU6-575P-201ENST00000411326 105 ntBASIC5.07□□□□□ -1.6
PROM1O43490 RN7SKP273-201ENST00000411392 314 ntBASIC5.07□□□□□ -1.6
PROM1O43490 RPL6P29-201ENST00000414863 865 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 MRPS36P1-201ENST00000421291 307 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms