Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM38O00635 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM38O00635 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM38O00635 ELOCP30-201ENST00000447108 299 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM38O00635 Z73417.1-201ENST00000447373 778 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM38O00635 MRPL42P4-201ENST00000453267 443 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 MTCO3P16-201ENST00000454456 754 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 OR2A20P-203ENST00000498397 1268 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM38O00635 GTF2F2P1-201ENST00000511083 675 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM38O00635 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM38O00635 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM38O00635 CR383656.6-201ENST00000550518 394 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM38O00635 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM38O00635 AC044913.1-201ENST00000557200 430 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM38O00635 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM38O00635 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM38O00635 AP005262.1-201ENST00000582646 997 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM38O00635 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM38O00635 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM38O00635 AL020997.3-201ENST00000602843 359 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 AP005137.2-201ENST00000609238 400 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 AC093799.2-201ENST00000610062 578 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM38O00635 AC015804.1-201ENST00000622935 435 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM38O00635 MFSD8-245ENST00000641743 948 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 AC073869.10-201ENST00000642016 354 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM38O00635 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
TRIM38O00635 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM38O00635 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM38O00635 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM38O00635 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM38O00635 INTS6P1-201ENST00000504674 2530 ntBASIC5.16□□□□□ -1.58
TRIM38O00635 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM38O00635 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM38O00635 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM38O00635 MFSD8-220ENST00000641243 1422 ntBASIC5.15□□□□□ -1.58
TRIM38O00635 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.15□□□□□ -1.58
TRIM38O00635 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TRIM38O00635 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
TRIM38O00635 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
TRIM38O00635 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.15□□□□□ -1.58
TRIM38O00635 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM38O00635 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM38O00635 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 RNU4-92P-201ENST00000363783 136 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 Y_RNA.436-201ENST00000384097 102 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 SNORD116-4-201ENST00000384733 96 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TRIM38O00635 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 RNU6-575P-201ENST00000411326 105 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 AC007738.1-201ENST00000413892 348 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM38O00635 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 AL360081.1-201ENST00000428299 555 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 RPS26P40-201ENST00000435209 294 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 CR769776.1-201ENST00000441254 787 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 EEF1A1P1-201ENST00000447052 739 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 ANKRD26P4-201ENST00000455755 950 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 RPS27P23-201ENST00000487608 251 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 AC113347.3-201ENST00000509113 148 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 AC022360.1-201ENST00000521058 340 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM38O00635 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM38O00635 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM38O00635 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM38O00635 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM38O00635 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM38O00635 RN7SL356P-201ENST00000582228 248 ntBASIC5.15□□□□□ -1.59
TRIM38O00635 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM38O00635 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM38O00635 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM38O00635 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM38O00635 EIF3FP1-201ENST00000613970 806 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms