Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL772161.1-201ENST00000439130 476 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 YWHAQP9-201ENST00000445891 512 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 ISCUP1-201ENST00000454451 448 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 AC108729.2-201ENST00000476543 840 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 RPL7P47-201ENST00000497299 556 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 AC098799.3-201ENST00000506095 438 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM1O00151 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 NDUFB4P9-201ENST00000511646 388 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM1O00151 RNA5SP143-201ENST00000516936 115 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM1O00151 NARSP2-201ENST00000518524 679 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM1O00151 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM1O00151 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 AC233266.2-201ENST00000567067 528 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.22□□□□□ -1.73
PDLIM1O00151 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM1O00151 AC068790.7-201ENST00000602347 528 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 AC007423.1-201ENST00000605009 627 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 AC135178.6-201ENST00000605314 398 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 AC025175.1-201ENST00000606482 759 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 AC100827.5-201ENST00000615883 426 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM1O00151 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM1O00151 A2MP1-204ENST00000566278 4130 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM1O00151 ZNF962P-201ENST00000443465 3140 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM1O00151 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM1O00151 ERCC6-202ENST00000374127 1782 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM1O00151 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM1O00151 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDLIM1O00151 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PDLIM1O00151 AC010928.1-201ENST00000592477 1447 ntBASIC4.21□□□□□ -1.73
PDLIM1O00151 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDLIM1O00151 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM1O00151 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM1O00151 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM1O00151 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
PDLIM1O00151 RN7SKP103-201ENST00000363848 320 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 SNORD6-201ENST00000365444 73 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM1O00151 MIR92A2-201ENST00000385299 75 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 USP9YP19-201ENST00000412165 485 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM1O00151 AL591848.1-201ENST00000413092 322 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC105402.1-201ENST00000413336 545 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AL357078.2-201ENST00000416486 427 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM1O00151 AL160175.1-201ENST00000428124 247 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC073069.1-201ENST00000428657 441 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AL359265.2-201ENST00000434367 631 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 CEACAMP1-201ENST00000434624 1035 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC005154.2-201ENST00000438110 379 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM1O00151 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM1O00151 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM1O00151 HMGB1P5-202ENST00000451497 985 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AL513533.1-201ENST00000453728 415 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 MTND2P6-201ENST00000455337 1030 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC107398.1-201ENST00000486904 505 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC010627.1-201ENST00000503819 1294 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC025768.1-201ENST00000510057 267 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM1O00151 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.21□□□□□ -1.74
PDLIM1O00151 RN7SKP276-201ENST00000516242 268 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC103833.1-201ENST00000517442 172 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM1O00151 SOX5P1-201ENST00000524155 1127 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC093014.1-201ENST00000548926 724 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.21□□□□□ -1.74
PDLIM1O00151 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM1O00151 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM1O00151 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.21□□□□□ -1.74
PDLIM1O00151 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM1O00151 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM1O00151 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.21□□□□□ -1.74
PDLIM1O00151 AC010680.3-201ENST00000604215 520 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AL160290.3-201ENST00000604869 165 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 MIR432-201ENST00000606207 94 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.21□□□□□ -1.74
PDLIM1O00151 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM1O00151 MIR1264-201ENST00000616374 69 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC100871.1-201ENST00000507871 1456 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 ASNSP1-204ENST00000641977 1664 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 AC009951.1-201ENST00000623674 2614 ntBASIC4.21□□□□□ -1.74
PDLIM1O00151 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM1O00151 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM1O00151 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM1O00151 NOL8P1-201ENST00000508336 3529 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms