Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RPL21P89-201ENST00000444021 467 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MTND2P25-201ENST00000449028 610 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 NPM1P39-201ENST00000449818 867 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC069499.1-201ENST00000489433 509 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC110792.1-201ENST00000491826 472 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RPL31P61-201ENST00000496160 376 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC010460.1-201ENST00000507087 466 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC109458.1-201ENST00000508858 316 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 PGBD4P4-201ENST00000509673 613 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MIR2114-201ENST00000516645 80 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MED28P5-201ENST00000528254 438 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC022916.3-201ENST00000592961 742 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL606490.9-201ENST00000603331 271 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AP000255.1-201ENST00000610276 676 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC034229.5-201ENST00000624258 185 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ERCC6-202ENST00000374127 1782 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 SNORA48.7-201ENST00000391302 135 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 HSPD1P16-201ENST00000402302 394 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AMD1P2-201ENST00000412936 992 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL590609.2-201ENST00000421430 368 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 USP9YP4-201ENST00000424401 1745 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 OR5BE1P-201ENST00000425977 939 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC096638.2-201ENST00000434965 711 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL356535.1-201ENST00000440335 398 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 VN1R25P-201ENST00000443385 738 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 YWHAQP9-201ENST00000445891 512 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC239809.1-201ENST00000450470 217 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 VN1R40P-201ENST00000455196 941 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RNA5SP246-201ENST00000458909 119 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC107015.1-201ENST00000466902 747 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC079171.1-201ENST00000568788 914 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 OR5BE1P-202ENST00000641168 1176 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 FAM35DP-201ENST00000323387 2712 ntBASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RNU1-85P-201ENST00000364127 164 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RN7SKP280-201ENST00000364196 304 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MIR554-201ENST00000384874 96 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MIR134-201ENST00000385258 73 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RN7SKP56-201ENST00000410513 331 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 OR8F1P-201ENST00000425243 930 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ATP5HP2-201ENST00000433885 485 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 PPIAP17-201ENST00000438507 471 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RPL7P1-201ENST00000468161 747 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RPL7P9-201ENST00000468715 747 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RN7SL271P-201ENST00000487601 295 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AGGF1P3-201ENST00000493675 1213 ntBASIC3.22□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RPL29P14-201ENST00000495837 428 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms