Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC018630.2-202ENST00000422992 927 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC079807.1-201ENST00000429993 481 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AL645936.2-201ENST00000430565 928 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 PUDPP2-201ENST00000431423 643 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC073415.1-201ENST00000449240 153 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AL929410.2-201ENST00000451170 189 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 CBX5P1-201ENST00000468470 561 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 RPS16P9-201ENST00000477220 427 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 RPL21P42-201ENST00000488408 464 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 RN7SL143P-201ENST00000496780 297 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AK3P4-201ENST00000504283 583 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 OR4D12P-201ENST00000509361 911 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC110792.2-201ENST00000510278 224 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 Y_RNA.711-201ENST00000516993 102 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 SETP2-201ENST00000553886 926 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC004232.1-201ENST00000571388 208 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC124312.5-201ENST00000604451 268 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC080078.3-201ENST00000605407 463 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC084781.2-201ENST00000615568 161 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC037198.3-201ENST00000616754 526 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 MFSD8-219ENST00000641228 2559 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC097714.1-201ENST00000511272 1647 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 MTND5P33-201ENST00000571250 1450 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 RNA5SP333-201ENST00000363466 118 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 RNA5SP514-201ENST00000363717 111 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 RNA5SP334-201ENST00000364825 118 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU6-639P-201ENST00000384074 107 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 Y_RNA.445-201ENST00000384168 102 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU6-193P-201ENST00000410977 107 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 RN7SKP137-201ENST00000411074 307 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC239367.3-201ENST00000428996 814 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 RPS20P5-201ENST00000434808 360 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 YWHAZP8-201ENST00000436935 731 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC239800.1-201ENST00000442049 719 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 RPS26P56-201ENST00000444468 240 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC005297.2-201ENST00000450430 606 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 RN7SL216P-201ENST00000471607 298 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 RPL21P6-201ENST00000479171 504 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 SNX18P23-201ENST00000510867 677 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 MIR4800-201ENST00000537353 80 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 CTSLP2-201ENST00000580501 394 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 MIR5682-201ENST00000584864 76 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC016925.2-201ENST00000605108 242 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU6-89P-201ENST00000606519 100 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AL627309.6-201ENST00000606857 840 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms