Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 OR5P1P-201ENST00000299512 925 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AL121657.1-201ENST00000327215 531 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 RNU1-20P-201ENST00000363314 162 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 RNU1-130P-201ENST00000363930 160 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 RNU1-63P-201ENST00000383902 164 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 CYCSP10-201ENST00000417973 294 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 MTND5P8-201ENST00000449817 1083 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AC012671.1-201ENST00000451912 203 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 VN1R32P-201ENST00000452234 905 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 ATP5G1P3-201ENST00000463301 410 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 UQCRHP4-201ENST00000471686 272 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 TCP11X3P-202ENST00000514289 1254 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 CKS1BP1-201ENST00000555221 240 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 BNIP3P5-201ENST00000562290 498 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 MIR3160-1-201ENST00000577972 85 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 RPL7P50-201ENST00000600588 727 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 BPIFA4P-203ENST00000603168 689 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AC003001.2-201ENST00000616294 831 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 ZYXP1-201ENST00000617638 118 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AL445567.2-201ENST00000618935 498 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 AC125257.1-201ENST00000560400 2930 ntBASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NPIPA1Q9UND3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AL592437.2-201ENST00000421655 2434 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AC005261.4-201ENST00000600047 1385 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 RNA5SP515-201ENST00000364570 118 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 RNU1-44P-201ENST00000384453 163 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 MIR142-201ENST00000384835 87 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 RPS26P8-201ENST00000393490 348 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AL356057.1-202ENST00000402263 756 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AL603766.1-201ENST00000407763 664 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AC062016.2-201ENST00000420950 676 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 RPS12P5-201ENST00000423449 371 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 FO393419.3-201ENST00000428741 282 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 ZNF965P-201ENST00000432501 817 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 MTCYBP21-201ENST00000443300 1113 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AC133473.1-201ENST00000455173 299 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AC020898.1-201ENST00000474167 787 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 AC011037.1-201ENST00000483964 558 ntBASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPIPA1Q9UND3 MIR2116-201ENST00000517221 80 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms