Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LRIT1Q9P2V4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.09□□□□□ -1.6
LRIT1Q9P2V4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.6
LRIT1Q9P2V4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
LRIT1Q9P2V4 SCARNA15-201ENST00000607520 4325 ntBASIC5.09□□□□□ -1.6
LRIT1Q9P2V4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
LRIT1Q9P2V4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC095050.2-201ENST00000510748 1458 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 METTL21EP-201ENST00000298105 713 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 VDAC2P1-201ENST00000399358 958 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 RNU6-575P-201ENST00000411326 105 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 RPL37P18-201ENST00000411602 243 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 USP9YP33-201ENST00000412220 421 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC013404.1-201ENST00000413068 249 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AL133482.1-201ENST00000415988 498 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC006466.1-201ENST00000438721 289 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 RPS29P10-201ENST00000439197 166 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 MTATP6P23-201ENST00000440153 476 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 HIGD1AP8-201ENST00000453927 274 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 RPL7AP52-201ENST00000458096 790 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 RNU7-27P-201ENST00000459281 62 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 RPL7P16-201ENST00000479738 738 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 NCOR1P1-202ENST00000486162 291 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 CBX3P3-201ENST00000508108 532 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC079140.3-201ENST00000511111 550 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC108471.1-201ENST00000513977 287 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 CDH12P4-201ENST00000517835 295 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 CDH12P3-201ENST00000517935 295 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 CDH12P1-201ENST00000518435 295 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AP002963.1-201ENST00000530590 184 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 EIF1P4-201ENST00000572664 335 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 ROCK1P1-201ENST00000573767 549 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 MIR3912-201ENST00000577566 105 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AL391497.1-201ENST00000608671 547 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC100827.5-201ENST00000615883 426 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 GVINP1-202ENST00000531871 7271 ntBASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRIT1Q9P2V4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 AC100757.1-201ENST00000616872 1835 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 NLRP3P1-201ENST00000622303 1785 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 AL672167.1-206ENST00000356293 943 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 RNA5SP123-201ENST00000363244 119 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 U3.4-201ENST00000363352 213 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 Y_RNA.359-201ENST00000365498 102 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 RNU1-74P-201ENST00000384108 171 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 RNU4-31P-201ENST00000384211 141 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 RPS27AP11-201ENST00000402798 447 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 MIR1182-201ENST00000408363 97 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 RNU2-16P-201ENST00000410712 136 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 VTA1P1-201ENST00000414044 866 ntBASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRIT1Q9P2V4 MTND1P23-201ENST00000416931 372 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms