Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 FKBP1BP1-201ENST00000553366 325 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 SETP1-201ENST00000556014 845 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 AC090751.1-201ENST00000566966 267 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 AC022662.1-201ENST00000580252 331 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 AC010487.1-201ENST00000594408 1172 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 MTND3P19-201ENST00000603825 345 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 MFSD8-245ENST00000641743 948 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
COL20A1Q9P218 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL20A1Q9P218 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.4□□□□□ -1.55
COL20A1Q9P218 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.4□□□□□ -1.55
COL20A1Q9P218 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.4□□□□□ -1.55
COL20A1Q9P218 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL20A1Q9P218 AC092376.2-201ENST00000622621 4116 ntBASIC5.4□□□□□ -1.55
COL20A1Q9P218 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL20A1Q9P218 OR4K15-201ENST00000305051 1216 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 ATP5F1P2-201ENST00000398143 760 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC136624.1-201ENST00000400791 413 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 ERHP2-201ENST00000402323 299 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC140479.3-201ENST00000418944 1126 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 RPS27AP7-201ENST00000422792 455 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 RGS17P1-201ENST00000423358 553 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 USP9YP11-201ENST00000427537 717 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 DNAJC19P7-201ENST00000428811 344 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC068287.1-201ENST00000430283 295 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AL451139.1-201ENST00000434718 346 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 MRPL42P4-201ENST00000453267 443 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 IGBP1P5-201ENST00000507524 1000 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 IGKV2-36-201ENST00000519999 223 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 COX6B1P6-201ENST00000522347 255 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 SULT1C2P2-201ENST00000562517 294 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 RN7SL652P-201ENST00000577769 300 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 MIR4666A-201ENST00000580160 79 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC005412.1-201ENST00000580812 1049 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 MIR4715-201ENST00000584117 79 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 AP000648.2-201ENST00000624182 404 ntBASIC5.39□□□□□ -1.55
COL20A1Q9P218 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.39□□□□□ -1.55
COL20A1Q9P218 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL20A1Q9P218 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL20A1Q9P218 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL20A1Q9P218 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL20A1Q9P218 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL20A1Q9P218 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL20A1Q9P218 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL20A1Q9P218 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL20A1Q9P218 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL20A1Q9P218 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL20A1Q9P218 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL20A1Q9P218 RNA5SP187-201ENST00000384400 119 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 SNORA40.2-201ENST00000390847 128 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 RNA5SP397-201ENST00000391323 118 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 AL590762.2-201ENST00000395798 571 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 RPS3AP23-201ENST00000401762 784 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 AL591848.1-201ENST00000413092 322 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 ELOCP9-201ENST00000418624 239 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 CENPIP1-201ENST00000425713 902 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 CYCSP24-201ENST00000445119 316 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC012512.1-201ENST00000446594 718 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 TPMTP4-201ENST00000450749 678 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC233982.1-201ENST00000451247 436 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 VN1R40P-201ENST00000455196 941 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 snoU13.1-201ENST00000459157 104 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 RPL23AP71-201ENST00000470966 469 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms