Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MIR525-201ENST00000384978 85 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 BTF3P7-201ENST00000407097 488 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AP000357.1-201ENST00000409926 1165 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 RN7SKP126-201ENST00000411143 300 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC211486.3-201ENST00000412694 621 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 ZNF863P-201ENST00000426746 417 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 USP9YP9-201ENST00000429406 715 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 UBE2V1P8-201ENST00000437166 265 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC093155.1-201ENST00000440164 826 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AL591363.1-201ENST00000450091 483 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 RPL5P24-201ENST00000463742 885 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 RN7SL188P-201ENST00000469842 285 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 ATP1B1P1-201ENST00000509767 915 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC004980.4-201ENST00000513375 203 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 MED28P5-201ENST00000528254 438 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC124293.1-201ENST00000530034 493 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 OR4K7P-201ENST00000580232 945 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC011447.4-201ENST00000587562 111 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AL356055.1-201ENST00000602528 446 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC012360.2-201ENST00000609349 391 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC025253.1-201ENST00000613623 543 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC011472.4-201ENST00000615848 491 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 MIR7844-201ENST00000616161 122 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AC073869.8-201ENST00000641806 335 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 CASC19-221ENST00000641309 1382 ntBASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM7Q9NR12 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 INTS6P1-201ENST00000504674 2530 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 Y_RNA.390-201ENST00000383932 102 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 RNA5SP87-201ENST00000384155 118 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 SNORD65.1-201ENST00000390889 71 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 ATG4AP1-201ENST00000416893 538 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AL672138.1-201ENST00000450604 1015 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 SSXP1-201ENST00000453640 473 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 RFC5P1-201ENST00000454419 874 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 PSMC1P13-201ENST00000458195 985 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 RNA5SP269-201ENST00000459032 137 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 RPL5P22-201ENST00000480199 884 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC012123.2-201ENST00000485809 248 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 MYL12BP2-201ENST00000503948 512 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC006499.5-201ENST00000505037 514 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 PRDX4P1-201ENST00000507189 574 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC109471.1-201ENST00000511631 612 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 MTND6P2-201ENST00000512226 524 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 RNU6-718P-201ENST00000516166 105 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC025260.1-201ENST00000548858 430 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 MIR4666A-201ENST00000580160 79 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 LSM1P2-201ENST00000604911 322 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 BNIP3P4-201ENST00000604946 565 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC106028.5-201ENST00000610332 395 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 STMN1P1-201ENST00000617809 440 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC074140.1-201ENST00000621617 208 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC012414.7-202ENST00000622705 1090 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 MIR7641-1-201ENST00000627518 61 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC000095.2-202ENST00000637415 154 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 AC073869.7-201ENST00000640874 297 ntBASIC6.03□□□□□ -1.44
PDLIM7Q9NR12 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms