Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AP001160.4-201ENST00000596971 382 ntBASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AL161616.1-201ENST00000611867 286 ntBASIC3.71□□□□□ -1.82
HMG20AQ9NP66 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 DHX40P1-201ENST00000588725 1412 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC087565.3-202ENST00000642085 1603 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 SNORA62.2-201ENST00000364672 152 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AL133270.1-201ENST00000402635 279 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 RPL23AP26-201ENST00000412728 464 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 SNRPFP1-201ENST00000414761 252 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 RPL7AP25-201ENST00000423357 805 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 MTCO1P45-201ENST00000431457 267 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC006466.1-201ENST00000438721 289 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AL513533.1-201ENST00000453728 415 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 RN7SL610P-201ENST00000463845 291 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 RPL7P22-201ENST00000466005 733 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 RPL23AP14-201ENST00000468281 468 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 RPS23P1-201ENST00000491662 432 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 ATP1B1P1-201ENST00000509767 915 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC026726.1-201ENST00000512859 601 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 RNU6-319P-201ENST00000516025 108 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC104997.1-201ENST00000519761 717 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AL109766.1-201ENST00000555080 552 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC084783.1-201ENST00000565846 910 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC020915.5-201ENST00000596836 964 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC008782.1-201ENST00000603386 430 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC079587.1-201ENST00000603846 277 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 RMST_5.1-201ENST00000618704 126 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AP001784.1-201ENST00000624107 428 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 UBE3AP2-201ENST00000429033 2259 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 CEP170P1-201ENST00000502249 4587 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 AC106871.1-201ENST00000568324 3102 ntBASIC3.7□□□□□ -1.82
HMG20AQ9NP66 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HMG20AQ9NP66 OR56B2P-202ENST00000641377 2453 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AL592148.3-201ENST00000608771 2646 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AC009951.1-201ENST00000623674 2614 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 RN7SKP103-201ENST00000363848 320 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 RNU1-130P-201ENST00000363930 160 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 RN7SKP177-201ENST00000410567 355 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 NPM1P34-201ENST00000428821 893 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AC073264.2-201ENST00000448886 166 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 CCRL1P1-201ENST00000449542 1053 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 RPL31P20-201ENST00000449593 360 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 RN7SL354P-201ENST00000469282 294 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AC092747.2-201ENST00000545069 983 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.69□□□□□ -1.82
HMG20AQ9NP66 SNORD39.2-201ENST00000579995 76 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 AC022146.1-201ENST00000595307 847 ntBASIC3.69□□□□□ -1.82
HMG20AQ9NP66 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms