Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 ARL2BPP10-201ENST00000446487 531 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 EEF1A1P1-201ENST00000447052 739 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 RN7SL271P-201ENST00000487601 295 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 RNU6-1102P-201ENST00000516149 96 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 MTCYBP19-201ENST00000517463 1124 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 NARSP2-201ENST00000518524 679 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 RPL23AP87-202ENST00000573039 466 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AC025946.2-201ENST00000603398 234 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AL451044.1-201ENST00000604867 238 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AL592494.3-201ENST00000609485 464 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AL445493.3-201ENST00000619568 477 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AL445363.3-201ENST00000623080 671 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 ERCC6-202ENST00000374127 1782 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 IPO8P1-201ENST00000455509 3109 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AL592148.3-201ENST00000608771 2646 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AC110792.3-201ENST00000595906 1614 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 SNORD51.1-201ENST00000365405 77 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AL583835.1-201ENST00000399570 407 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 RNA5SP36-201ENST00000410197 133 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 BRWD1P3-201ENST00000428816 390 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 MTCO1P45-201ENST00000431457 267 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 RPL36AP15-201ENST00000444514 266 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 PHBP16-201ENST00000446318 950 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 HSPE1P22-201ENST00000456856 327 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 RPL7P32-201ENST00000457119 744 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 RPL29P14-201ENST00000495837 428 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 HPRT1P2-201ENST00000505250 544 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 PGBD4P4-201ENST00000509673 613 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 RNU6-415P-201ENST00000516252 97 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AP006289.1-201ENST00000538089 277 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 HMGB3P26-201ENST00000560051 582 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AC092868.3-201ENST00000560515 784 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AC012417.1-201ENST00000582307 1039 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 BNIP3P27-201ENST00000599991 412 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 ABI1P1-201ENST00000603375 1120 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AL391834.1-201ENST00000609609 560 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AL391834.2-201ENST00000609982 546 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AC090246.1-201ENST00000616499 426 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AC105105.5-201ENST00000622635 1294 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 AC021106.3-201ENST00000623925 531 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 OR56B2P-202ENST00000641377 2453 ntBASIC5.02□□□□□ -1.61
UPF2Q9HAU5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UPF2Q9HAU5 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
UPF2Q9HAU5 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
UPF2Q9HAU5 AC090017.1-201ENST00000548612 1779 ntBASIC5.01□□□□□ -1.61
UPF2Q9HAU5 AC027287.1-201ENST00000553115 1453 ntBASIC5.01□□□□□ -1.61
UPF2Q9HAU5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
UPF2Q9HAU5 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.01□□□□□ -1.61
UPF2Q9HAU5 AL031985.3-201ENST00000565390 2449 ntBASIC5.01□□□□□ -1.61
UPF2Q9HAU5 OR4K15-201ENST00000305051 1216 ntBASIC5.01□□□□□ -1.61
UPF2Q9HAU5 RNU1-14P-201ENST00000362759 152 ntBASIC5.01□□□□□ -1.61
UPF2Q9HAU5 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
UPF2Q9HAU5 RNA5SP87-201ENST00000384155 118 ntBASIC5.01□□□□□ -1.61
UPF2Q9HAU5 AL356057.1-202ENST00000402263 756 ntBASIC5.01□□□□□ -1.61
UPF2Q9HAU5 MIR1251-201ENST00000408552 70 ntBASIC5.01□□□□□ -1.61
UPF2Q9HAU5 P2RY10P2-201ENST00000416730 913 ntBASIC5.01□□□□□ -1.61
UPF2Q9HAU5 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.01□□□□□ -1.61
UPF2Q9HAU5 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.01□□□□□ -1.61
UPF2Q9HAU5 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.01□□□□□ -1.61
UPF2Q9HAU5 RPS20P4-201ENST00000461659 355 ntBASIC5.01□□□□□ -1.61
UPF2Q9HAU5 AC108729.2-201ENST00000476543 840 ntBASIC5.01□□□□□ -1.61
UPF2Q9HAU5 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.01□□□□□ -1.61
UPF2Q9HAU5 PCNAP1-201ENST00000505363 709 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms