Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 DSTNP2-201ENST00000504533 515 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 RNU6-718P-201ENST00000516166 105 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 Y_RNA.667-201ENST00000516212 107 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS11Q9H270 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS11Q9H270 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 OR6C7P-201ENST00000547875 934 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AC002310.3-201ENST00000569728 723 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 MTCO1P40-201ENST00000574371 625 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS11Q9H270 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.53□□□□□ -1.52
VPS11Q9H270 AC063977.5-201ENST00000601044 974 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AP001836.1-201ENST00000604675 523 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AC090517.2-201ENST00000614966 680 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AC010133.1-201ENST00000615809 842 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VPS11Q9H270 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
VPS11Q9H270 AC116563.2-201ENST00000624751 535 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AP001052.1-201ENST00000626421 99 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 CDRT1-208ENST00000630868 794 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.53□□□□□ -1.52
VPS11Q9H270 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
VPS11Q9H270 AL354685.2-201ENST00000448218 1447 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS11Q9H270 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS11Q9H270 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS11Q9H270 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS11Q9H270 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
VPS11Q9H270 AP000756.2-201ENST00000624168 2567 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VPS11Q9H270 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VPS11Q9H270 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 AL672167.1-206ENST00000356293 943 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS11Q9H270 OR1L6-202ENST00000373684 1044 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS11Q9H270 RNU6-116P-201ENST00000384042 109 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS11Q9H270 RNU2-6P-201ENST00000411404 190 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AC245054.1-201ENST00000420944 258 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 IPPKP1-201ENST00000422501 768 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
VPS11Q9H270 HMGB3P24-201ENST00000433260 622 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS11Q9H270 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS11Q9H270 RPS26P30-201ENST00000443431 335 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 EEF1E1P1-201ENST00000446998 430 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 PRPF38AP1-201ENST00000451976 933 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 OR2AF1P-201ENST00000454899 889 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 BX248409.1-201ENST00000455497 255 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS11Q9H270 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 RPS17P15-201ENST00000475609 349 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AC022215.1-201ENST00000481770 362 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 RN7SL809P-201ENST00000482040 297 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AC098799.3-201ENST00000506095 438 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AC114781.3-201ENST00000512083 142 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AL671862.1-201ENST00000515851 349 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AC008562.1-201ENST00000521763 330 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AC027369.5-201ENST00000533838 755 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS11Q9H270 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS11Q9H270 LSM3P2-201ENST00000551246 273 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS11Q9H270 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS11Q9H270 U73023.1-201ENST00000603134 700 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 AC128687.1-201ENST00000605304 619 ntBASIC5.52□□□□□ -1.53
VPS11Q9H270 NDUFA8P1-201ENST00000605525 367 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms