Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RNU6-1103P-201ENST00000384150 107 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 RNA5SP105-201ENST00000391123 113 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AL049693.1-201ENST00000402760 611 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 HMGN1P20-201ENST00000411849 300 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC083875.1-201ENST00000419509 405 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 SNRPEP10-201ENST00000420249 274 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 RPS15AP30-201ENST00000420976 390 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AL513175.1-201ENST00000431492 780 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 RPL7P29-201ENST00000437151 728 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 PGBD4P3-201ENST00000440731 581 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 DNAJC19P5-201ENST00000443295 316 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 ARPC3P5-201ENST00000448802 534 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 NPM1P39-201ENST00000449818 867 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 RPL38P1-201ENST00000460914 211 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 RN7SL165P-201ENST00000477476 291 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC079080.1-201ENST00000479841 822 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 FAM172BP-201ENST00000487497 1089 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC007182.2-201ENST00000489251 402 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 RPL35P6-201ENST00000490024 372 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC012170.1-201ENST00000495139 359 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC111193.1-201ENST00000504097 155 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC060775.1-201ENST00000518241 520 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 VN1R80P-201ENST00000597126 338 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC115286.1-201ENST00000604298 434 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC015982.1-201ENST00000608113 465 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AL352984.2-202ENST00000613699 155 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 MKKS-204ENST00000639674 192 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC021242.1-201ENST00000507315 2035 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 ZNF37BP-203ENST00000452306 1352 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 AOX3P-204ENST00000491025 2107 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.58-201ENST00000362807 102 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.154-201ENST00000363624 102 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 RNY3P1-201ENST00000365085 102 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 RNY3-201ENST00000365484 102 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.394-201ENST00000383942 103 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.419-201ENST00000384041 102 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.481-201ENST00000384373 102 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.490-201ENST00000384413 102 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 U8.14-201ENST00000390843 143 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 RNA5SP118-201ENST00000410385 109 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 AC093084.1-201ENST00000424233 687 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 AC127526.2-201ENST00000426436 775 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 BX890604.2-201ENST00000427883 474 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 TUBB4BP6-201ENST00000437576 479 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 SKP1P1-201ENST00000438081 489 ntBASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.03□□□□□ -1.6
SSBP3Q9BWW4 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms