Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.42□□□□□ -1.7
BPIFA3Q9BQP9 PSMA6P4-201ENST00000603247 718 ntBASIC4.42□□□□□ -1.7
BPIFA3Q9BQP9 AL049539.1-201ENST00000611964 459 ntBASIC4.42□□□□□ -1.7
BPIFA3Q9BQP9 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.42□□□□□ -1.7
BPIFA3Q9BQP9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BPIFA3Q9BQP9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BPIFA3Q9BQP9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.42□□□□□ -1.7
BPIFA3Q9BQP9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AL592437.2-201ENST00000421655 2434 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 RPS16P5-201ENST00000406501 404 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AL035696.2-201ENST00000407941 709 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 RPL37P18-201ENST00000411602 243 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 ELOCP19-201ENST00000411919 318 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AL590139.1-201ENST00000416267 400 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 MTCO3P20-201ENST00000454926 688 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 OR7L1P-201ENST00000456181 380 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 RPL38P1-201ENST00000460914 211 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AC041039.1-201ENST00000485656 536 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 RN7SL604P-201ENST00000492589 296 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AC025674.1-201ENST00000507074 324 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AL049874.4-201ENST00000557593 255 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AC090877.1-201ENST00000561418 344 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 MTCO2P22-201ENST00000603246 681 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 ATE1-AS1-202ENST00000636460 506 ntBASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
BPIFA3Q9BQP9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BPIFA3Q9BQP9 AL049555.1-201ENST00000562834 1933 ntBASIC4.4□□□□□ -1.7
BPIFA3Q9BQP9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.4□□□□□ -1.7
BPIFA3Q9BQP9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
BPIFA3Q9BQP9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
BPIFA3Q9BQP9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BPIFA3Q9BQP9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BPIFA3Q9BQP9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BPIFA3Q9BQP9 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 RN7SKP222-201ENST00000410651 315 ntBASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 AMD1P2-201ENST00000412936 992 ntBASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 RPL7AP73-201ENST00000413490 353 ntBASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 C1DP3-201ENST00000455013 423 ntBASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 RNU6-347P-201ENST00000516658 105 ntBASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 MTCYBP19-201ENST00000517463 1124 ntBASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 HNRNPCP4-201ENST00000571636 900 ntBASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 MIR4715-201ENST00000584117 79 ntBASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 AC138473.1-201ENST00000605717 526 ntBASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 AC022893.2-201ENST00000564832 3296 ntBASIC4.4□□□□□ -1.71
BPIFA3Q9BQP9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 RNA5SP399-201ENST00000364003 117 ntBASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 RNA5SP366-201ENST00000365454 123 ntBASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 AL603766.1-201ENST00000407763 664 ntBASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 BTF3P9-201ENST00000418784 283 ntBASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 AC007064.3-201ENST00000422608 359 ntBASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 OR5AW1P-201ENST00000426334 1006 ntBASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 HIGD1AP4-201ENST00000430194 280 ntBASIC4.39□□□□□ -1.71
BPIFA3Q9BQP9 AL365396.1-201ENST00000430854 671 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms