Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AP005264.7-201ENST00000625003 745 ntBASIC4.16□□□□□ -1.74
ECHDC3Q96DC8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
ECHDC3Q96DC8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ECHDC3Q96DC8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ECHDC3Q96DC8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ECHDC3Q96DC8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
ECHDC3Q96DC8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
ECHDC3Q96DC8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
ECHDC3Q96DC8 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ECHDC3Q96DC8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.15□□□□□ -1.74
ECHDC3Q96DC8 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.15□□□□□ -1.74
ECHDC3Q96DC8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ECHDC3Q96DC8 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
ECHDC3Q96DC8 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ECHDC3Q96DC8 RNA5SP130-201ENST00000364431 114 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 FABP12P1-201ENST00000401911 322 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 TPT1P2-201ENST00000413105 503 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AC073464.3-201ENST00000422564 712 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 EIF2S2P3-201ENST00000428356 999 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AL157884.3-201ENST00000448273 1184 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 RPL31P20-201ENST00000449593 360 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 RPL5P32-201ENST00000454085 879 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 RPL7P1-201ENST00000468161 747 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 RPL7P9-201ENST00000468715 747 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AC147055.1-201ENST00000509261 750 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 VWA8P1-201ENST00000510889 176 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 SEC11B-201ENST00000518383 499 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 SMARCE1P4-201ENST00000523647 241 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 GLRXP2-201ENST00000555594 321 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 HNRNPCP4-201ENST00000571636 900 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 MTND6P33-201ENST00000571794 183 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AL121834.1-201ENST00000572284 509 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AC092653.1-201ENST00000608509 531 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AL133370.2-201ENST00000619934 439 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AC067852.7-201ENST00000623270 535 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 AC092159.4-201ENST00000624944 550 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 RNA5SP196-201ENST00000625967 102 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 KPNA2P2-201ENST00000419546 1489 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 SPATA2P1-201ENST00000431223 2055 ntBASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ECHDC3Q96DC8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC018529.3-201ENST00000624212 2254 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 OR11H4-201ENST00000315409 1082 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 RNU1-108P-201ENST00000362556 161 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 RNU6-304P-201ENST00000364855 107 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 GCNT6-201ENST00000379591 934 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 DYNLL1P7-201ENST00000429273 258 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC068587.1-201ENST00000483613 781 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 PPBPP1-201ENST00000510807 373 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC108471.1-201ENST00000513977 287 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 MTCO1P35-201ENST00000515270 228 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 RNU6-347P-201ENST00000516658 105 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC090281.1-201ENST00000523019 276 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC007224.1-201ENST00000564410 144 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 MIR3160-1-201ENST00000577972 85 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 PSMA6P4-201ENST00000603247 718 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC084373.1-201ENST00000603311 235 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AL139286.1-201ENST00000604465 483 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC114878.2-201ENST00000604863 1251 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AL031666.3-201ENST00000609320 1006 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC107905.1-201ENST00000616204 426 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AL669942.2-201ENST00000620352 697 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC008785.1-201ENST00000624475 456 ntBASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
ECHDC3Q96DC8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms