Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MTCYBP33-201ENST00000575007 1130 ntBASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 AC087783.2-201ENST00000605070 562 ntBASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 AL158042.1-201ENST00000605338 460 ntBASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 AC093799.2-201ENST00000610062 578 ntBASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 AL360219.1-201ENST00000610230 366 ntBASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 AL022401.1-201ENST00000619498 108 ntBASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 AC019206.1-201ENST00000621938 425 ntBASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 MIR1322-201ENST00000638013 71 ntBASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLIP4Q8N3C7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC073055.1-201ENST00000456901 1621 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC091046.3-201ENST00000631455 1574 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 RNU1-87P-201ENST00000363727 170 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 RNU6-353P-201ENST00000364266 108 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 Y_RNA.318-201ENST00000365131 97 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 RNU1-106P-201ENST00000384382 164 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 RNU6-83P-201ENST00000384568 112 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC092642.1-201ENST00000392417 425 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AL590084.1-201ENST00000407885 387 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 RN7SKP222-201ENST00000410651 315 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 TBCAP2-201ENST00000416175 326 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 OR6K4P-201ENST00000423179 955 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 MTCO1P52-201ENST00000433928 531 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 UBE2D3P1-201ENST00000436669 444 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AL450263.2-201ENST00000439400 589 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 RPL7L1P1-201ENST00000448259 785 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 MYO5BP2-201ENST00000449815 1277 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AL445669.2-201ENST00000454425 421 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC126121.1-201ENST00000482313 553 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 RN7SL97P-201ENST00000486780 299 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC020890.1-201ENST00000491837 504 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 HPRT1P2-201ENST00000505250 544 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC113430.1-201ENST00000506872 718 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 STMN1P2-201ENST00000508435 439 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC004980.4-201ENST00000513375 203 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 MRPS33P3-201ENST00000513456 322 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 MTCO3P15-201ENST00000526563 574 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC092490.3-201ENST00000545370 572 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC087477.6-201ENST00000559595 843 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 ATP5F1P7-201ENST00000567330 760 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 TVP23CP2-201ENST00000571473 623 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AL354943.1-201ENST00000572103 781 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 MIR3691-201ENST00000578066 90 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AP001269.3-201ENST00000588718 329 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC006116.3-201ENST00000592968 361 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC025165.5-201ENST00000602802 578 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 MEMO1P5-201ENST00000604810 406 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC018638.7-201ENST00000605836 1114 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 MIR6729-201ENST00000618194 65 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 OR8B1P-202ENST00000641132 1178 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 AC008758.3-201ENST00000507003 1829 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 Z98755.1-201ENST00000407015 1384 ntBASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP4Q8N3C7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms