Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 AC090686.1-201ENST00000481577 749 ntBASIC3.8□□□□□ -1.8
RIF1Q5UIP0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 NCAPGP2-201ENST00000557911 754 ntBASIC3.8□□□□□ -1.8
RIF1Q5UIP0 OR2AS2P-201ENST00000606902 342 ntBASIC3.8□□□□□ -1.8
RIF1Q5UIP0 FRG1EP-201ENST00000634469 770 ntBASIC3.8□□□□□ -1.8
RIF1Q5UIP0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 EI24P3-201ENST00000399046 1062 ntBASIC3.79□□□□□ -1.8
RIF1Q5UIP0 RPL23AP37-201ENST00000479658 549 ntBASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 MIR3922-201ENST00000585192 84 ntBASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AC091905.2-201ENST00000623143 306 ntBASIC3.79□□□□□ -1.8
RIF1Q5UIP0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 RPL21P91-201ENST00000429231 479 ntBASIC3.79□□□□□ -1.8
RIF1Q5UIP0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AC011825.1-201ENST00000484967 388 ntBASIC3.79□□□□□ -1.8
RIF1Q5UIP0 RNA5SP249-201ENST00000516127 99 ntBASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AC006349.1-201ENST00000555526 235 ntBASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AC104984.5-201ENST00000586878 94 ntBASIC3.79□□□□□ -1.8
RIF1Q5UIP0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AP002001.2-201ENST00000529025 1469 ntBASIC3.79□□□□□ -1.8
RIF1Q5UIP0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC3.79□□□□□ -1.8
RIF1Q5UIP0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 AC096644.3-201ENST00000416788 338 ntBASIC3.78□□□□□ -1.8
RIF1Q5UIP0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 AC005183.1-201ENST00000603687 1979 ntBASIC3.78□□□□□ -1.8
RIF1Q5UIP0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 HSFY4P-201ENST00000415994 1181 ntBASIC3.78□□□□□ -1.8
RIF1Q5UIP0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC3.78□□□□□ -1.8
RIF1Q5UIP0 AL606834.2-201ENST00000602954 668 ntBASIC3.78□□□□□ -1.8
RIF1Q5UIP0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
RIF1Q5UIP0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AL117378.2-201ENST00000622916 1337 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AC079777.1-201ENST00000623836 1953 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AC104333.2-201ENST00000422630 192 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 UBE2V1P1-201ENST00000430836 445 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 RSL24D1P3-201ENST00000449255 495 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 RPL21P11-201ENST00000461458 483 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AC096576.1-201ENST00000489014 359 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 RNA5SP164-201ENST00000516533 110 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 RANP9-201ENST00000519957 271 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 MIR4276-201ENST00000584832 70 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 BTBD10P1-201ENST00000549824 1352 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 FTLP6-201ENST00000355274 422 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 RAD23BP3-201ENST00000454157 1152 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.77□□□□□ -1.81
RIF1Q5UIP0 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 NPM1P47-201ENST00000560843 856 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 MIR5680-201ENST00000577577 84 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AC009303.3-201ENST00000591103 736 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AL160290.3-201ENST00000604869 165 ntBASIC3.77□□□□□ -1.81
RIF1Q5UIP0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms