Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 RPL21P126-201ENST00000470049 478 ntBASIC3.64□□□□□ -1.83
CCDC58Q4VC31 RN7SL629P-201ENST00000489622 285 ntBASIC3.64□□□□□ -1.83
CCDC58Q4VC31 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 OR7H2P-201ENST00000513483 306 ntBASIC3.64□□□□□ -1.83
CCDC58Q4VC31 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC068790.7-201ENST00000602347 528 ntBASIC3.64□□□□□ -1.83
CCDC58Q4VC31 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC016769.4-201ENST00000616893 535 ntBASIC3.64□□□□□ -1.83
CCDC58Q4VC31 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC131971.1-201ENST00000332881 1482 ntBASIC3.64□□□□□ -1.83
CCDC58Q4VC31 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AL139811.1-201ENST00000424779 2299 ntBASIC3.64□□□□□ -1.83
CCDC58Q4VC31 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 EIF2AP4-201ENST00000424793 1781 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AC000367.1-201ENST00000452711 1766 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 LINC00561-201ENST00000565815 2738 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 RN7SKP235-201ENST00000410662 305 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 FAR2P2-201ENST00000413041 594 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 VN1R25P-201ENST00000443385 738 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 MTCO3P16-201ENST00000454456 754 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 VN1R40P-201ENST00000455196 941 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 SNRPGP3-201ENST00000469405 227 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AC012170.1-201ENST00000495139 359 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AL035404.1-201ENST00000497982 568 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 UBE2CP3-201ENST00000502715 450 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 RNU7-143P-201ENST00000516781 65 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AC007687.1-201ENST00000602704 304 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AL592295.2-201ENST00000612578 206 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 MIR6886-201ENST00000619864 61 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AL445363.3-201ENST00000623080 671 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 AF127577.6-201ENST00000623352 2191 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC58Q4VC31 CIR1P2-201ENST00000514821 1342 ntBASIC3.63□□□□□ -1.83
CCDC58Q4VC31 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 RARSP1-201ENST00000542842 1418 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AL583835.1-201ENST00000399570 407 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 SPTLC1P2-201ENST00000407089 121 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AL035696.2-201ENST00000407941 709 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 SNORA11.5-201ENST00000408163 128 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 MIR1251-201ENST00000408552 70 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AC073464.3-201ENST00000422564 712 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 RPL23AP1-201ENST00000428990 471 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms