Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RPL23AP43-201ENST00000446445 471 ntBASIC3.56□□□□□ -1.84
UBA52P62987 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.56□□□□□ -1.84
UBA52P62987 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.56□□□□□ -1.84
UBA52P62987 DHFRP3-201ENST00000455595 559 ntBASIC3.56□□□□□ -1.84
UBA52P62987 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.56□□□□□ -1.84
UBA52P62987 BTF3L4P4-201ENST00000506381 449 ntBASIC3.56□□□□□ -1.84
UBA52P62987 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.56□□□□□ -1.84
UBA52P62987 AP001804.2-201ENST00000533932 910 ntBASIC3.56□□□□□ -1.84
UBA52P62987 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.56□□□□□ -1.84
UBA52P62987 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.56□□□□□ -1.84
UBA52P62987 AC245389.1-201ENST00000605141 529 ntBASIC3.56□□□□□ -1.84
UBA52P62987 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.56□□□□□ -1.84
UBA52P62987 AC140479.6-201ENST00000633535 357 ntBASIC3.56□□□□□ -1.84
UBA52P62987 MIR6715B-201ENST00000637172 77 ntBASIC3.56□□□□□ -1.84
UBA52P62987 OR2L1P-202ENST00000641567 1023 ntBASIC3.56□□□□□ -1.84
UBA52P62987 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UBA52P62987 PNPT1P2-201ENST00000456768 2050 ntBASIC3.56□□□□□ -1.84
UBA52P62987 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBA52P62987 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBA52P62987 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.56□□□□□ -1.84
UBA52P62987 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
UBA52P62987 LINC00622-201ENST00000562811 1570 ntBASIC3.55□□□□□ -1.84
UBA52P62987 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.55□□□□□ -1.84
UBA52P62987 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBA52P62987 AC008033.1-201ENST00000216407 1162 ntBASIC3.55□□□□□ -1.84
UBA52P62987 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBA52P62987 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
UBA52P62987 MIR365B-201ENST00000362317 111 ntBASIC3.55□□□□□ -1.84
UBA52P62987 RNU1-18P-201ENST00000363062 164 ntBASIC3.55□□□□□ -1.84
UBA52P62987 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.55□□□□□ -1.84
UBA52P62987 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
UBA52P62987 PPIAP31-201ENST00000405422 495 ntBASIC3.55□□□□□ -1.84
UBA52P62987 NPM1P26-201ENST00000426339 738 ntBASIC3.55□□□□□ -1.84
UBA52P62987 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.55□□□□□ -1.84
UBA52P62987 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.55□□□□□ -1.84
UBA52P62987 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UBA52P62987 RAD23BP3-201ENST00000454157 1152 ntBASIC3.55□□□□□ -1.84
UBA52P62987 RPS20P4-201ENST00000461659 355 ntBASIC3.55□□□□□ -1.84
UBA52P62987 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
UBA52P62987 AC021146.1-201ENST00000511202 716 ntBASIC3.55□□□□□ -1.84
UBA52P62987 SAP18P1-201ENST00000512058 390 ntBASIC3.55□□□□□ -1.84
UBA52P62987 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.55□□□□□ -1.84
UBA52P62987 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.55□□□□□ -1.84
UBA52P62987 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.55□□□□□ -1.84
UBA52P62987 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.55□□□□□ -1.84
UBA52P62987 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.55□□□□□ -1.84
UBA52P62987 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.55□□□□□ -1.84
UBA52P62987 AC099676.1-201ENST00000608886 657 ntBASIC3.55□□□□□ -1.84
UBA52P62987 U7.8-201ENST00000619968 63 ntBASIC3.55□□□□□ -1.84
UBA52P62987 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.55□□□□□ -1.84
UBA52P62987 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.55□□□□□ -1.84
UBA52P62987 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.55□□□□□ -1.84
UBA52P62987 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBA52P62987 LINC00561-201ENST00000565815 2738 ntBASIC3.55□□□□□ -1.84
UBA52P62987 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBA52P62987 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.55□□□□□ -1.84
UBA52P62987 AP001486.2-201ENST00000561652 5113 ntBASIC3.55□□□□□ -1.84
UBA52P62987 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.54□□□□□ -1.84
UBA52P62987 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.54□□□□□ -1.84
UBA52P62987 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
UBA52P62987 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.54□□□□□ -1.84
UBA52P62987 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBA52P62987 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.54□□□□□ -1.84
UBA52P62987 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBA52P62987 AC008725.1-201ENST00000605123 2263 ntBASIC3.54□□□□□ -1.84
UBA52P62987 Z73965.1-201ENST00000623412 2297 ntBASIC3.54□□□□□ -1.84
UBA52P62987 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.54□□□□□ -1.84
UBA52P62987 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
UBA52P62987 MIR331-201ENST00000362302 94 ntBASIC3.54□□□□□ -1.84
UBA52P62987 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.54□□□□□ -1.84
UBA52P62987 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBA52P62987 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBA52P62987 MT-RNR1-201ENST00000389680 954 ntBASIC3.54□□□□□ -1.84
UBA52P62987 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.54□□□□□ -1.84
UBA52P62987 AL389915.1-201ENST00000422463 466 ntBASIC3.54□□□□□ -1.84
UBA52P62987 AL034379.1-201ENST00000423216 253 ntBASIC3.54□□□□□ -1.84
UBA52P62987 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.54□□□□□ -1.84
UBA52P62987 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.54□□□□□ -1.84
UBA52P62987 YY1P1-201ENST00000427625 668 ntBASIC3.54□□□□□ -1.84
UBA52P62987 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.54□□□□□ -1.84
UBA52P62987 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.54□□□□□ -1.84
UBA52P62987 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.54□□□□□ -1.84
UBA52P62987 BTG3P1-201ENST00000435859 716 ntBASIC3.54□□□□□ -1.84
UBA52P62987 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.54□□□□□ -1.84
UBA52P62987 MTND6P5-201ENST00000448266 512 ntBASIC3.54□□□□□ -1.84
UBA52P62987 AC012671.1-201ENST00000451912 203 ntBASIC3.54□□□□□ -1.84
UBA52P62987 RN7SL93P-201ENST00000463035 293 ntBASIC3.54□□□□□ -1.84
UBA52P62987 RPS27AP17-201ENST00000463344 455 ntBASIC3.54□□□□□ -1.84
UBA52P62987 AC010307.1-201ENST00000467206 836 ntBASIC3.54□□□□□ -1.84
UBA52P62987 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBA52P62987 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.54□□□□□ -1.84
UBA52P62987 AC018442.3-201ENST00000523025 183 ntBASIC3.54□□□□□ -1.84
UBA52P62987 TRAV8-5-201ENST00000537369 341 ntBASIC3.54□□□□□ -1.84
UBA52P62987 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.54□□□□□ -1.84
UBA52P62987 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBA52P62987 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.54□□□□□ -1.84
UBA52P62987 AL109741.3-201ENST00000561748 592 ntBASIC3.54□□□□□ -1.84
UBA52P62987 CD24P2-201ENST00000565486 219 ntBASIC3.54□□□□□ -1.84
UBA52P62987 MIR4429-201ENST00000580105 73 ntBASIC3.54□□□□□ -1.84
UBA52P62987 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms