Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC090312.1-201ENST00000580637 348 ntBASIC4.06□□□□□ -1.76
CLDN6P56747 AC091178.1-203ENST00000584586 279 ntBASIC4.06□□□□□ -1.76
CLDN6P56747 AC026979.4-201ENST00000606555 645 ntBASIC4.06□□□□□ -1.76
CLDN6P56747 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN6P56747 AC131238.1-201ENST00000617135 328 ntBASIC4.06□□□□□ -1.76
CLDN6P56747 AC145207.9-201ENST00000623802 325 ntBASIC4.06□□□□□ -1.76
CLDN6P56747 AC092159.4-201ENST00000624944 550 ntBASIC4.06□□□□□ -1.76
CLDN6P56747 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN6P56747 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN6P56747 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN6P56747 AC027290.2-201ENST00000623210 18662 ntBASIC4.06□□□□□ -1.76
CLDN6P56747 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN6P56747 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN6P56747 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN6P56747 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN6P56747 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN6P56747 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN6P56747 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN6P56747 AC010329.2-201ENST00000595195 2737 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 RNU1-20P-201ENST00000363314 162 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 RNU6-525P-201ENST00000363685 104 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN6P56747 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN6P56747 HDGFP1-201ENST00000405943 252 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AP000357.1-201ENST00000409926 1165 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 RAB9AP3-201ENST00000412737 573 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN6P56747 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN6P56747 AL392003.1-201ENST00000434394 243 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 BTG3P1-201ENST00000435859 716 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 RPL6P5-201ENST00000445678 828 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 RAB9AP1-201ENST00000449393 573 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 EIF2S2P5-201ENST00000457635 968 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 ATP5G1P3-201ENST00000463301 410 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AC007688.1-201ENST00000475592 759 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN6P56747 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN6P56747 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.05□□□□□ -1.76
CLDN6P56747 HPRT1P2-201ENST00000505250 544 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN6P56747 PGBD4P4-201ENST00000509673 613 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN6P56747 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN6P56747 AC068714.1-201ENST00000559623 800 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AC027455.1-201ENST00000574104 594 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AC027281.1-201ENST00000574178 758 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AC022655.2-201ENST00000577280 318 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AC133552.5-201ENST00000604266 540 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AC112230.1-201ENST00000604342 547 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 BNIP3P19-201ENST00000605397 577 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 AL590410.1-201ENST00000617925 333 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN6P56747 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CLDN6P56747 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN6P56747 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CLDN6P56747 AC006042.3-201ENST00000454684 1469 ntBASIC4.05□□□□□ -1.76
CLDN6P56747 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLDN6P56747 OR51C1P-202ENST00000641159 1444 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLDN6P56747 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLDN6P56747 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLDN6P56747 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLDN6P56747 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.04□□□□□ -1.76
CLDN6P56747 RNU6-225P-201ENST00000384613 103 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 SNORD65-201ENST00000391079 73 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 RNU6-603P-201ENST00000411403 107 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN6P56747 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.04□□□□□ -1.76
CLDN6P56747 AC004448.2-201ENST00000422360 586 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 AC115285.1-201ENST00000424879 736 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 CEACAMP1-201ENST00000434624 1035 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 TBCAP1-201ENST00000436520 327 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 RPL12P46-201ENST00000436610 195 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.04□□□□□ -1.76
CLDN6P56747 AC073587.1-201ENST00000447093 876 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 BUD31P2-201ENST00000449374 300 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 RPL31P20-201ENST00000449593 360 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN6P56747 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN6P56747 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.04□□□□□ -1.76
CLDN6P56747 ACTR3P3-201ENST00000480448 893 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 METTL15P1-201ENST00000481421 1045 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 STMN1P2-201ENST00000508435 439 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 AC108471.1-201ENST00000513977 287 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN6P56747 RNA5SP446-201ENST00000515955 82 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 SEC11B-201ENST00000518383 499 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN6P56747 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.04□□□□□ -1.76
CLDN6P56747 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLDN6P56747 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.04□□□□□ -1.76
CLDN6P56747 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN6P56747 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN6P56747 HMGB2P1-201ENST00000591146 634 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 AC008739.3-201ENST00000603262 127 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 AC138473.1-201ENST00000605717 526 ntBASIC4.04□□□□□ -1.76
CLDN6P56747 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN6P56747 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms