Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH12P55289 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH12P55289 AL161747.1-201ENST00000480068 358 ntBASIC4.54□□□□□ -1.68
CDH12P55289 GAPDHP39-201ENST00000481866 979 ntBASIC4.54□□□□□ -1.68
CDH12P55289 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH12P55289 AC104971.1-201ENST00000495117 578 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AC072052.1-201ENST00000496556 306 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.54□□□□□ -1.68
CDH12P55289 AC098799.3-201ENST00000506095 438 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH12P55289 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 OR4C2P-201ENST00000530855 1064 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 AC010198.2-201ENST00000550612 259 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH12P55289 AL390726.5-202ENST00000564800 256 ntBASIC4.54□□□□□ -1.68
CDH12P55289 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH12P55289 DPRXP5-201ENST00000604662 539 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AC064807.4-201ENST00000607201 407 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AC097505.1-201ENST00000610199 565 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AC019206.1-201ENST00000621938 425 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AC006840.1-201ENST00000623069 542 ntBASIC4.54□□□□□ -1.68
CDH12P55289 ATE1-AS1-202ENST00000636460 506 ntBASIC4.54□□□□□ -1.68
CDH12P55289 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CDH12P55289 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH12P55289 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH12P55289 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH12P55289 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CDH12P55289 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH12P55289 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH12P55289 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH12P55289 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDH12P55289 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CDH12P55289 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDH12P55289 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH12P55289 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH12P55289 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH12P55289 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH12P55289 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH12P55289 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDH12P55289 SNORA66-201ENST00000384792 133 ntBASIC4.53□□□□□ -1.68
CDH12P55289 RN7SKP206-201ENST00000410823 293 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 DDX39BP1-205ENST00000422507 192 ntBASIC4.53□□□□□ -1.68
CDH12P55289 CNOT7P1-201ENST00000429006 852 ntBASIC4.53□□□□□ -1.68
CDH12P55289 MTCO3P21-201ENST00000430791 643 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 AC092393.1-201ENST00000439625 742 ntBASIC4.53□□□□□ -1.68
CDH12P55289 RPS7P5-201ENST00000441482 581 ntBASIC4.53□□□□□ -1.68
CDH12P55289 RPL34P20-201ENST00000442771 351 ntBASIC4.53□□□□□ -1.68
CDH12P55289 YWHAQP9-201ENST00000445891 512 ntBASIC4.53□□□□□ -1.68
CDH12P55289 HMGB1P48-201ENST00000446155 598 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH12P55289 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH12P55289 RN7SL172P-201ENST00000460535 303 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AC010468.1-201ENST00000461022 817 ntBASIC4.53□□□□□ -1.68
CDH12P55289 COPS8P2-201ENST00000473228 627 ntBASIC4.53□□□□□ -1.68
CDH12P55289 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH12P55289 HMGN2P25-201ENST00000486956 268 ntBASIC4.53□□□□□ -1.68
CDH12P55289 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.53□□□□□ -1.68
CDH12P55289 AC106872.4-201ENST00000510050 523 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH12P55289 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 AC093755.1-201ENST00000512950 1023 ntBASIC4.53□□□□□ -1.68
CDH12P55289 RPL7L1P4-201ENST00000513004 707 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AC008837.2-201ENST00000513076 418 ntBASIC4.53□□□□□ -1.68
CDH12P55289 NDUFB4P12-201ENST00000513465 390 ntBASIC4.53□□□□□ -1.68
CDH12P55289 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.53□□□□□ -1.68
CDH12P55289 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH12P55289 AC010306.1-201ENST00000523223 1117 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.53□□□□□ -1.68
CDH12P55289 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH12P55289 AP003461.1-201ENST00000528866 78 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH12P55289 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH12P55289 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.53□□□□□ -1.68
CDH12P55289 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 AL442163.2-201ENST00000553912 710 ntBASIC4.53□□□□□ -1.68
CDH12P55289 NMNAT1P1-201ENST00000554095 876 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AC109446.2-201ENST00000567872 497 ntBASIC4.53□□□□□ -1.68
CDH12P55289 MIR4675-201ENST00000577898 77 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH12P55289 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH12P55289 Z99497.2-201ENST00000603634 310 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AC069304.3-201ENST00000603938 1084 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AL358072.1-201ENST00000604156 575 ntBASIC4.53□□□□□ -1.68
CDH12P55289 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CDH12P55289 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.53□□□□□ -1.68
CDH12P55289 AC087783.2-201ENST00000605070 562 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms