Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
HMGCS2P54868 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS2P54868 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS2P54868 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.65□□□□□ -1.66
HMGCS2P54868 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.65□□□□□ -1.66
HMGCS2P54868 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS2P54868 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGCS2P54868 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS2P54868 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.65□□□□□ -1.67
HMGCS2P54868 AC073335.1-201ENST00000427776 363 ntBASIC4.65□□□□□ -1.67
HMGCS2P54868 NPM1P34-201ENST00000428821 893 ntBASIC4.65□□□□□ -1.67
HMGCS2P54868 AC091286.1-201ENST00000431233 461 ntBASIC4.65□□□□□ -1.67
HMGCS2P54868 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGCS2P54868 RSL24D1P8-201ENST00000434442 492 ntBASIC4.65□□□□□ -1.67
HMGCS2P54868 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS2P54868 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGCS2P54868 NANOGP10-201ENST00000453325 895 ntBASIC4.65□□□□□ -1.67
HMGCS2P54868 HSPE1P22-201ENST00000456856 327 ntBASIC4.65□□□□□ -1.67
HMGCS2P54868 RPS20P21-201ENST00000466859 343 ntBASIC4.65□□□□□ -1.67
HMGCS2P54868 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGCS2P54868 PPIAP15-201ENST00000479662 484 ntBASIC4.65□□□□□ -1.67
HMGCS2P54868 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
HMGCS2P54868 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGCS2P54868 NDUFA5P2-201ENST00000519723 344 ntBASIC4.65□□□□□ -1.67
HMGCS2P54868 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS2P54868 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGCS2P54868 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS2P54868 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS2P54868 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGCS2P54868 MIR432-201ENST00000606207 94 ntBASIC4.65□□□□□ -1.67
HMGCS2P54868 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS2P54868 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGCS2P54868 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGCS2P54868 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMGCS2P54868 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.65□□□□□ -1.67
HMGCS2P54868 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HMGCS2P54868 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGCS2P54868 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMGCS2P54868 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMGCS2P54868 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HMGCS2P54868 NOL8P1-201ENST00000508336 3529 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 AC021242.1-201ENST00000507315 2035 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 RNA5SP119-201ENST00000362715 117 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 RNU6-670P-201ENST00000364312 104 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGCS2P54868 AC104297.1-201ENST00000393779 870 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
HMGCS2P54868 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGCS2P54868 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 Z97055.1-201ENST00000419730 712 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCS2P54868 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS2P54868 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS2P54868 RPL7P49-201ENST00000471402 708 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 AC022336.1-201ENST00000475510 337 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS2P54868 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGCS2P54868 RNU1-95P-201ENST00000516357 160 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 RNU1-128P-201ENST00000516704 160 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS2P54868 AC018442.3-201ENST00000523025 183 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS2P54868 AC068993.1-201ENST00000546724 589 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 YPEL5P3-201ENST00000547227 352 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS2P54868 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS2P54868 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS2P54868 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS2P54868 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCS2P54868 OR7M1P-201ENST00000608946 533 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS2P54868 AC064801.1-201ENST00000612025 407 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 AL121890.2-201ENST00000617644 465 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 AL118508.4-201ENST00000624142 1176 ntBASIC4.64□□□□□ -1.67
HMGCS2P54868 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HMGCS2P54868 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HMGCS2P54868 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
HMGCS2P54868 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS2P54868 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS2P54868 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS2P54868 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS2P54868 AL161912.2-201ENST00000565707 3007 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS2P54868 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
HMGCS2P54868 AC067945.1-201ENST00000342609 618 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 RNU6-697P-201ENST00000363348 107 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 RNA5SP399-201ENST00000364003 117 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms