Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCNKAP51800 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
CLCNKAP51800 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCNKAP51800 OR4K15-201ENST00000305051 1216 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 SNORA70F-201ENST00000384142 135 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 MIR320B1-201ENST00000390209 79 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLCNKAP51800 U3.35-201ENST00000408405 208 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLCNKAP51800 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.64□□□□□ -1.67
CLCNKAP51800 AL591848.1-201ENST00000413092 322 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AC105402.1-201ENST00000413336 545 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 SSR1P2-201ENST00000415208 787 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AC119751.6-201ENST00000416712 186 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCNKAP51800 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCNKAP51800 E2F6P2-201ENST00000420708 748 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.64□□□□□ -1.67
CLCNKAP51800 RPL12P28-201ENST00000430852 489 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCNKAP51800 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCNKAP51800 H2AFZP5-201ENST00000446960 382 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 SEPT14P24-201ENST00000447236 180 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AC092685.1-201ENST00000447960 1243 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCNKAP51800 AC079168.2-201ENST00000453977 416 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AC090686.1-201ENST00000481577 749 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AC025164.1-201ENST00000496249 478 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCNKAP51800 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCNKAP51800 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCNKAP51800 RNU6-1028P-201ENST00000517164 93 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.64□□□□□ -1.67
CLCNKAP51800 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCNKAP51800 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCNKAP51800 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCNKAP51800 AC008083.2-201ENST00000546707 476 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AC087477.6-201ENST00000559595 843 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCNKAP51800 AC027455.1-201ENST00000574104 594 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 RN7SL652P-201ENST00000577769 300 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 MIR4330-201ENST00000579077 105 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCNKAP51800 AL136295.6-201ENST00000610486 658 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 PART1_2.1-201ENST00000612397 250 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 FRG1HP-204ENST00000617940 757 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AL121890.3-201ENST00000618494 516 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 AL035461.2-201ENST00000619201 524 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.64□□□□□ -1.67
CLCNKAP51800 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLCNKAP51800 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCNKAP51800 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLCNKAP51800 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.64□□□□□ -1.67
CLCNKAP51800 CYP1D1P-201ENST00000416662 1433 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 DHX40P1-201ENST00000588725 1412 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCNKAP51800 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCNKAP51800 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CLCNKAP51800 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CLCNKAP51800 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
CLCNKAP51800 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
CLCNKAP51800 AC120338.1-201ENST00000625074 1541 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CLCNKAP51800 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCNKAP51800 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CLCNKAP51800 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLCNKAP51800 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLCNKAP51800 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCNKAP51800 RNU6-398P-201ENST00000384143 109 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 RNA5SP397-201ENST00000391323 118 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 AL049697.2-201ENST00000403708 294 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 RPL7P27-201ENST00000403775 720 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CLCNKAP51800 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCNKAP51800 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCNKAP51800 RNA5SP498-201ENST00000411342 120 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 ATG4AP1-201ENST00000416893 538 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 AC140479.3-201ENST00000418944 1126 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 AC246680.2-201ENST00000422106 389 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 AC092648.1-201ENST00000425870 423 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCNKAP51800 AL035246.1-201ENST00000433554 1255 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 AL353093.1-201ENST00000441292 436 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 CEACAMP9-201ENST00000442990 513 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 MRPL48P1-201ENST00000445390 636 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 OR51B8P-201ENST00000449892 769 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 RPS29P33-201ENST00000456717 146 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCNKAP51800 AC068587.2-201ENST00000478386 781 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 MTCO3P35-201ENST00000485582 781 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCNKAP51800 RN7SKP287-201ENST00000516546 266 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 OR8I1P-201ENST00000529291 931 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCNKAP51800 LRRC34P1-201ENST00000542742 915 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 AC025260.1-201ENST00000548858 430 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 AC087897.1-201ENST00000550134 156 ntBASIC4.63□□□□□ -1.67
CLCNKAP51800 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms