Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC040174.2-201ENST00000602701 465 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD4P46934 AL122125.1-201ENST00000616999 600 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 AC009237.17-201ENST00000618111 748 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 AC026951.1-201ENST00000559530 2459 ntBASIC4.78□□□□□ -1.64
NEDD4P46934 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD4P46934 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD4P46934 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.78□□□□□ -1.64
NEDD4P46934 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD4P46934 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
NEDD4P46934 AC005332.5-201ENST00000591222 2919 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 RNA5SP388-201ENST00000362584 119 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 RNU6-1251P-201ENST00000364502 107 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 RNA5SP283-201ENST00000365604 119 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 SNORD65-201ENST00000391079 73 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NEDD4P46934 GTF2IP2-201ENST00000424290 697 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 AL117339.2-201ENST00000430475 180 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.77□□□□□ -1.65
NEDD4P46934 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.77□□□□□ -1.65
NEDD4P46934 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.77□□□□□ -1.65
NEDD4P46934 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.77□□□□□ -1.65
NEDD4P46934 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.77□□□□□ -1.65
NEDD4P46934 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.77□□□□□ -1.65
NEDD4P46934 HMGB3P22-202ENST00000451823 572 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.77□□□□□ -1.65
NEDD4P46934 RPL5P32-201ENST00000454085 879 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.77□□□□□ -1.65
NEDD4P46934 RPS26P15-201ENST00000488067 348 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.77□□□□□ -1.65
NEDD4P46934 FTH1P21-201ENST00000512179 511 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 SETP12-201ENST00000514068 805 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.77□□□□□ -1.65
NEDD4P46934 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
NEDD4P46934 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.77□□□□□ -1.65
NEDD4P46934 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.77□□□□□ -1.65
NEDD4P46934 AC092868.3-201ENST00000560515 784 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 AC012417.1-201ENST00000582307 1039 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.77□□□□□ -1.65
NEDD4P46934 AC009704.2-201ENST00000618739 483 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 AC112484.5-201ENST00000624189 228 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.77□□□□□ -1.65
NEDD4P46934 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEDD4P46934 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NEDD4P46934 CASC19-261ENST00000641853 1638 ntBASIC4.77□□□□□ -1.65
NEDD4P46934 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.77□□□□□ -1.65
NEDD4P46934 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEDD4P46934 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEDD4P46934 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NEDD4P46934 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEDD4P46934 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.77□□□□□ -1.65
NEDD4P46934 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.76□□□□□ -1.65
NEDD4P46934 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NEDD4P46934 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NEDD4P46934 MIR421-201ENST00000365696 85 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 AL691449.1-201ENST00000426570 421 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 AC011742.1-201ENST00000431448 434 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 FTLP19-201ENST00000433300 394 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 ELOCP18-201ENST00000434209 337 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.76□□□□□ -1.65
NEDD4P46934 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.76□□□□□ -1.65
NEDD4P46934 Z99127.2-201ENST00000441426 334 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 AL162151.2-201ENST00000448875 158 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 MTND6P32-201ENST00000457611 483 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.76□□□□□ -1.65
NEDD4P46934 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.76□□□□□ -1.65
NEDD4P46934 AC025445.1-201ENST00000502728 300 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.76□□□□□ -1.65
NEDD4P46934 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.76□□□□□ -1.65
NEDD4P46934 AC017037.1-201ENST00000508460 471 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NEDD4P46934 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.76□□□□□ -1.65
NEDD4P46934 UBTFL9-201ENST00000534504 1148 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.76□□□□□ -1.65
NEDD4P46934 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.76□□□□□ -1.65
NEDD4P46934 AC015722.2-201ENST00000622210 551 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 AL356490.1-201ENST00000623079 479 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.76□□□□□ -1.65
NEDD4P46934 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NEDD4P46934 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NEDD4P46934 AC097504.1-201ENST00000515103 2415 ntBASIC4.76□□□□□ -1.65
NEDD4P46934 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
NEDD4P46934 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NEDD4P46934 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NEDD4P46934 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.76□□□□□ -1.65
NEDD4P46934 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.76□□□□□ -1.65
NEDD4P46934 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NEDD4P46934 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD4P46934 SNORA60-201ENST00000362396 134 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 RNA5SP399-201ENST00000364003 117 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.75□□□□□ -1.65
NEDD4P46934 CCNB2P1-201ENST00000399411 1150 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 RNU2-72P-201ENST00000411175 163 ntBASIC4.75□□□□□ -1.65
NEDD4P46934 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.75□□□□□ -1.65
NEDD4P46934 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.75□□□□□ -1.65
NEDD4P46934 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.75□□□□□ -1.65
NEDD4P46934 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.75□□□□□ -1.65
NEDD4P46934 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.75□□□□□ -1.65
NEDD4P46934 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms