Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.54□□□□□ -1.68
HNF4AP41235 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.54□□□□□ -1.68
HNF4AP41235 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.54□□□□□ -1.68
HNF4AP41235 RN7SKP157-201ENST00000516174 282 ntBASIC4.54□□□□□ -1.68
HNF4AP41235 AC083923.1-201ENST00000523708 376 ntBASIC4.54□□□□□ -1.68
HNF4AP41235 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.54□□□□□ -1.68
HNF4AP41235 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.54□□□□□ -1.68
HNF4AP41235 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.54□□□□□ -1.68
HNF4AP41235 MIR4480-201ENST00000582492 71 ntBASIC4.54□□□□□ -1.68
HNF4AP41235 AC090330.1-201ENST00000588646 764 ntBASIC4.54□□□□□ -1.68
HNF4AP41235 BNIP3P27-201ENST00000599991 412 ntBASIC4.54□□□□□ -1.68
HNF4AP41235 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HNF4AP41235 AC100827.5-201ENST00000615883 426 ntBASIC4.54□□□□□ -1.68
HNF4AP41235 AL359757.1-201ENST00000623176 255 ntBASIC4.54□□□□□ -1.68
HNF4AP41235 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
HNF4AP41235 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
HNF4AP41235 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HNF4AP41235 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HNF4AP41235 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HNF4AP41235 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
HNF4AP41235 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.53□□□□□ -1.68
HNF4AP41235 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HNF4AP41235 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HNF4AP41235 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.53□□□□□ -1.68
HNF4AP41235 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HNF4AP41235 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HNF4AP41235 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HNF4AP41235 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HNF4AP41235 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HNF4AP41235 ENSAP3-201ENST00000312710 333 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 RNU6-543P-201ENST00000362576 108 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HNF4AP41235 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HNF4AP41235 SNORA51.12-201ENST00000384448 134 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 AL035419.1-201ENST00000397037 564 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 MIR921-201ENST00000401133 56 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.53□□□□□ -1.68
HNF4AP41235 AL355143.1-201ENST00000407101 841 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 RN7SKP267-201ENST00000410381 285 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.53□□□□□ -1.68
HNF4AP41235 NUP35P2-201ENST00000416748 943 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.53□□□□□ -1.68
HNF4AP41235 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.53□□□□□ -1.68
HNF4AP41235 GTF2IP2-201ENST00000424290 697 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 AL360081.1-201ENST00000428299 555 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 CDY14P-201ENST00000431260 1014 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.53□□□□□ -1.68
HNF4AP41235 CDY12P-201ENST00000440679 1015 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 AC092809.1-201ENST00000441469 474 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 CDY13P-201ENST00000445813 1015 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 CDY23P-201ENST00000451661 1014 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.53□□□□□ -1.68
HNF4AP41235 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.53□□□□□ -1.68
HNF4AP41235 EIF2S2P5-201ENST00000457635 968 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 SNORD108-201ENST00000459332 71 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 RPL7AP28-201ENST00000464513 571 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 AC105233.1-201ENST00000498840 781 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.53□□□□□ -1.68
HNF4AP41235 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.53□□□□□ -1.68
HNF4AP41235 AC133963.2-201ENST00000513686 578 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.53□□□□□ -1.68
HNF4AP41235 RN7SKP234-201ENST00000517173 224 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.53□□□□□ -1.68
HNF4AP41235 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.53□□□□□ -1.68
HNF4AP41235 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.53□□□□□ -1.68
HNF4AP41235 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.53□□□□□ -1.68
HNF4AP41235 AC113194.1-201ENST00000606037 500 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 AP001784.1-201ENST00000624107 428 ntBASIC4.53□□□□□ -1.68
HNF4AP41235 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HNF4AP41235 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HNF4AP41235 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HNF4AP41235 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
HNF4AP41235 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.53□□□□□ -1.69
HNF4AP41235 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.53□□□□□ -1.69
HNF4AP41235 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HNF4AP41235 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HNF4AP41235 AC104446.1-201ENST00000613728 1321 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 NSRP1P1-201ENST00000444067 1693 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.52□□□□□ -1.69
HNF4AP41235 MIR153-1-201ENST00000384914 90 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 RNU6-796P-201ENST00000391086 107 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HNF4AP41235 RNA5SP239-201ENST00000410218 129 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 RN7SKP177-201ENST00000410567 355 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 OR51B3P-201ENST00000412287 913 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 RSU1P3-201ENST00000412878 835 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.52□□□□□ -1.69
HNF4AP41235 AC073310.1-201ENST00000423226 1033 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 FABP7P1-201ENST00000424004 391 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.52□□□□□ -1.69
HNF4AP41235 RPS6P12-201ENST00000432491 726 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AL772161.1-201ENST00000439130 476 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 ELOCP3-201ENST00000439303 348 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.52□□□□□ -1.69
HNF4AP41235 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.52□□□□□ -1.69
HNF4AP41235 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.52□□□□□ -1.69
HNF4AP41235 AL035407.2-201ENST00000454090 378 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AC005008.1-201ENST00000456151 612 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 RPL37P6-202ENST00000464216 403 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms