Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD13P35453 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD13P35453 AC006927.2-201ENST00000639256 389 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD13P35453 AL596275.2-204ENST00000641628 552 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AL596275.2-206ENST00000641957 626 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD13P35453 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXD13P35453 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD13P35453 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXD13P35453 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD13P35453 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD13P35453 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD13P35453 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD13P35453 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD13P35453 RAD17P1-201ENST00000418130 2042 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HOXD13P35453 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD13P35453 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD13P35453 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD13P35453 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXD13P35453 AL049555.1-201ENST00000562834 1933 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD13P35453 SNORD65C-201ENST00000390962 71 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 RNU6-932P-201ENST00000391108 106 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 MIR937-201ENST00000401271 86 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXD13P35453 AC114814.2-201ENST00000419195 485 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 SAGE2P-201ENST00000420011 2126 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXD13P35453 UQCRBP1-201ENST00000421129 336 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 AC246680.2-201ENST00000422106 389 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD13P35453 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXD13P35453 UBE2V1P5-201ENST00000440070 405 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXD13P35453 AC012671.1-201ENST00000451912 203 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD13P35453 Z95152.1-201ENST00000453556 656 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 BX248409.1-201ENST00000455497 255 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXD13P35453 AC092905.1-201ENST00000467527 949 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.92□□□□□ -1.62
HOXD13P35453 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD13P35453 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXD13P35453 RPL7L1P13-201ENST00000511702 739 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 RNA5SP360-201ENST00000516555 118 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 AL442163.2-201ENST00000553912 710 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 AC027455.1-201ENST00000574104 594 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 RN7SL622P-201ENST00000585292 275 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD13P35453 AC008966.2-201ENST00000606157 453 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 AC243756.2-201ENST00000618406 463 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 LINC01808-202ENST00000641680 1116 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXD13P35453 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD13P35453 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD13P35453 AL592148.3-201ENST00000608771 2646 ntBASIC4.92□□□□□ -1.62
HOXD13P35453 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD13P35453 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD13P35453 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD13P35453 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
HOXD13P35453 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXD13P35453 RNA5SP332-201ENST00000391063 115 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD13P35453 FCF1P5-201ENST00000406490 482 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 RPS16P5-201ENST00000406501 404 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 MTND2P15-201ENST00000418575 892 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXD13P35453 AC023347.2-201ENST00000433994 462 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXD13P35453 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXD13P35453 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXD13P35453 HMGB3P21-201ENST00000452483 547 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 MTND2P39-201ENST00000457230 764 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
HOXD13P35453 AC022795.1-201ENST00000473808 480 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXD13P35453 AC139103.1-201ENST00000534696 1030 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD13P35453 CYB5AP5-201ENST00000549779 389 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HOXD13P35453 AC023824.3-201ENST00000569003 562 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 HMGB2P1-201ENST00000591146 634 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 AC133794.1-201ENST00000602731 914 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 AL160290.3-201ENST00000604869 165 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 BNIP3P4-201ENST00000604946 565 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 AL133243.1-201ENST00000614487 366 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HOXD13P35453 AC103798.2-201ENST00000624292 632 ntBASIC4.91□□□□□ -1.62
HOXD13P35453 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXD13P35453 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD13P35453 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.91□□□□□ -1.62
HOXD13P35453 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD13P35453 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXD13P35453 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HOXD13P35453 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms