Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 USP9YP2-201ENST00000504503 1000 ntBASIC5.53□□□□□ -1.52
CPS1P31327 USP9YP1-201ENST00000513521 1002 ntBASIC5.53□□□□□ -1.52
CPS1P31327 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.53□□□□□ -1.52
CPS1P31327 AC007599.1-201ENST00000568688 1174 ntBASIC5.53□□□□□ -1.52
CPS1P31327 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.53□□□□□ -1.52
CPS1P31327 MIR4325-201ENST00000583049 90 ntBASIC5.53□□□□□ -1.52
CPS1P31327 AC244505.7-201ENST00000599675 272 ntBASIC5.53□□□□□ -1.52
CPS1P31327 AC107294.1-201ENST00000609524 467 ntBASIC5.53□□□□□ -1.52
CPS1P31327 AC138907.10-201ENST00000623708 983 ntBASIC5.53□□□□□ -1.52
CPS1P31327 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CPS1P31327 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.53□□□□□ -1.52
CPS1P31327 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CPS1P31327 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CPS1P31327 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CPS1P31327 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CPS1P31327 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CPS1P31327 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CPS1P31327 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
CPS1P31327 AC118273.1-201ENST00000525324 3006 ntBASIC5.53□□□□□ -1.52
CPS1P31327 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.53□□□□□ -1.52
CPS1P31327 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
CPS1P31327 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CPS1P31327 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CPS1P31327 AC067945.1-201ENST00000342609 618 ntBASIC5.53□□□□□ -1.52
CPS1P31327 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CPS1P31327 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.53□□□□□ -1.52
CPS1P31327 AL831737.1-201ENST00000441288 271 ntBASIC5.53□□□□□ -1.52
CPS1P31327 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.53□□□□□ -1.52
CPS1P31327 TPT1P1-201ENST00000458495 518 ntBASIC5.53□□□□□ -1.52
CPS1P31327 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CPS1P31327 AC026784.1-201ENST00000507986 352 ntBASIC5.53□□□□□ -1.52
CPS1P31327 SNORA70.17-201ENST00000516449 133 ntBASIC5.53□□□□□ -1.52
CPS1P31327 NPM1P47-201ENST00000560843 856 ntBASIC5.53□□□□□ -1.52
CPS1P31327 MIR3936-201ENST00000584304 110 ntBASIC5.53□□□□□ -1.52
CPS1P31327 AL451044.1-201ENST00000604867 238 ntBASIC5.53□□□□□ -1.52
CPS1P31327 SNORD91B-202ENST00000608459 222 ntBASIC5.53□□□□□ -1.52
CPS1P31327 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CPS1P31327 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CPS1P31327 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CPS1P31327 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CPS1P31327 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CPS1P31327 MIR195-201ENST00000385194 87 ntBASIC5.52□□□□□ -1.53
CPS1P31327 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CPS1P31327 RPL7P44-201ENST00000424827 742 ntBASIC5.52□□□□□ -1.53
CPS1P31327 Z74696.2-201ENST00000436514 498 ntBASIC5.52□□□□□ -1.53
CPS1P31327 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.52□□□□□ -1.53
CPS1P31327 RPS3AP14-201ENST00000483907 780 ntBASIC5.52□□□□□ -1.53
CPS1P31327 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CPS1P31327 AP000563.1-201ENST00000490865 758 ntBASIC5.52□□□□□ -1.53
CPS1P31327 RPL7P23-201ENST00000493874 747 ntBASIC5.52□□□□□ -1.53
CPS1P31327 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.52□□□□□ -1.53
CPS1P31327 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CPS1P31327 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.52□□□□□ -1.53
CPS1P31327 RPL23AP87-202ENST00000573039 466 ntBASIC5.52□□□□□ -1.53
CPS1P31327 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.52□□□□□ -1.53
CPS1P31327 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.52□□□□□ -1.53
CPS1P31327 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.52□□□□□ -1.53
CPS1P31327 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CPS1P31327 YPEL5P2-201ENST00000605553 359 ntBASIC5.52□□□□□ -1.53
CPS1P31327 AC119674.1-212ENST00000641155 993 ntBASIC5.52□□□□□ -1.53
CPS1P31327 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CPS1P31327 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.52□□□□□ -1.53
CPS1P31327 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
CPS1P31327 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CPS1P31327 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CPS1P31327 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CPS1P31327 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CPS1P31327 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CPS1P31327 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CPS1P31327 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.51□□□□□ -1.53
CPS1P31327 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.51□□□□□ -1.53
CPS1P31327 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.51□□□□□ -1.53
CPS1P31327 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.51□□□□□ -1.53
CPS1P31327 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.51□□□□□ -1.53
CPS1P31327 APOOP2-201ENST00000461561 539 ntBASIC5.51□□□□□ -1.53
CPS1P31327 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.51□□□□□ -1.53
CPS1P31327 SLC25A36P1-201ENST00000590111 465 ntBASIC5.51□□□□□ -1.53
CPS1P31327 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.51□□□□□ -1.53
CPS1P31327 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.51□□□□□ -1.53
CPS1P31327 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.51□□□□□ -1.53
CPS1P31327 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CPS1P31327 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.51□□□□□ -1.53
CPS1P31327 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CPS1P31327 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CPS1P31327 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CPS1P31327 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CPS1P31327 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CPS1P31327 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CPS1P31327 UBA52P6-201ENST00000399822 382 ntBASIC5.5□□□□□ -1.53
CPS1P31327 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.5□□□□□ -1.53
CPS1P31327 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.5□□□□□ -1.53
CPS1P31327 RN7SKP46-201ENST00000515942 234 ntBASIC5.5□□□□□ -1.53
CPS1P31327 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.5□□□□□ -1.53
CPS1P31327 AC104662.1-201ENST00000604448 511 ntBASIC5.5□□□□□ -1.53
CPS1P31327 AL137849.1-201ENST00000604767 169 ntBASIC5.5□□□□□ -1.53
CPS1P31327 AC023509.5-201ENST00000617434 807 ntBASIC5.5□□□□□ -1.53
CPS1P31327 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.5□□□□□ -1.53
CPS1P31327 ATE1-AS1-202ENST00000636460 506 ntBASIC5.5□□□□□ -1.53
CPS1P31327 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CPS1P31327 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms