Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC8P31273 AC006116.5-201ENST00000591936 559 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC8P31273 RPAP2P1-201ENST00000603626 1168 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 AL391834.2-201ENST00000609982 546 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 AL445493.3-201ENST00000619568 477 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC8P31273 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC8P31273 FRG1DP-201ENST00000635586 771 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HOXC8P31273 MTND4P31-201ENST00000425607 1343 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC8P31273 AC005261.4-201ENST00000600047 1385 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC8P31273 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC8P31273 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
HOXC8P31273 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC8P31273 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC8P31273 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
HOXC8P31273 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC8P31273 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC8P31273 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXC8P31273 RN7SKP280-201ENST00000364196 304 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXC8P31273 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXC8P31273 RNU6-925P-201ENST00000384629 104 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC8P31273 PPIAP31-201ENST00000405422 495 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 NRBF2P2-201ENST00000413087 861 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC8P31273 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC8P31273 RPL21P91-201ENST00000429231 479 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC8P31273 AC122718.1-201ENST00000439448 744 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC8P31273 GTF3AP5-201ENST00000442645 697 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 HSFY6P-201ENST00000445573 403 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AC239809.1-201ENST00000450470 217 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 FAM133DP-201ENST00000464802 691 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AC018635.1-201ENST00000468292 1030 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC8P31273 RPS27AP13-201ENST00000498403 237 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AC119751.4-201ENST00000507498 357 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.86□□□□□ -1.63
HOXC8P31273 RNA5SP446-201ENST00000515955 82 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 MIR2116-201ENST00000517221 80 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC8P31273 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC8P31273 AP002812.4-201ENST00000532139 286 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC8P31273 AC025260.1-201ENST00000548858 430 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AC079148.1-201ENST00000565944 819 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC8P31273 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.86□□□□□ -1.63
HOXC8P31273 RN7SL600P-201ENST00000581811 299 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC8P31273 BNIP3P40-201ENST00000596017 556 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AL161729.3-201ENST00000603533 673 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AC026979.4-201ENST00000606555 645 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AL355816.1-201ENST00000607951 118 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AC243654.2-201ENST00000612843 443 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AC245389.2-201ENST00000616023 576 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AC242843.1-201ENST00000618702 573 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AC090506.2-201ENST00000624521 419 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC8P31273 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC8P31273 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC8P31273 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC8P31273 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC8P31273 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXC8P31273 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXC8P31273 AC114546.3-201ENST00000623582 1734 ntBASIC4.86□□□□□ -1.63
HOXC8P31273 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC8P31273 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HOXC8P31273 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC8P31273 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC8P31273 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC8P31273 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC8P31273 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
HOXC8P31273 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC8P31273 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HOXC8P31273 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC8P31273 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC8P31273 AL583835.1-201ENST00000399570 407 ntBASIC4.85□□□□□ -1.63
HOXC8P31273 MIR921-201ENST00000401133 56 ntBASIC4.85□□□□□ -1.63
HOXC8P31273 AL592291.1-201ENST00000403830 352 ntBASIC4.85□□□□□ -1.63
HOXC8P31273 OR8G2P-201ENST00000412796 908 ntBASIC4.85□□□□□ -1.63
HOXC8P31273 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC8P31273 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC8P31273 UBE2V1P3-201ENST00000439651 417 ntBASIC4.85□□□□□ -1.63
HOXC8P31273 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC8P31273 EEF1A1P1-201ENST00000447052 739 ntBASIC4.85□□□□□ -1.63
HOXC8P31273 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC8P31273 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC8P31273 RPS27AP17-201ENST00000463344 455 ntBASIC4.85□□□□□ -1.63
HOXC8P31273 RPS7P7-201ENST00000463499 571 ntBASIC4.85□□□□□ -1.63
HOXC8P31273 AC006511.1-201ENST00000470614 315 ntBASIC4.85□□□□□ -1.63
HOXC8P31273 PARP4P3-201ENST00000510265 317 ntBASIC4.85□□□□□ -1.63
HOXC8P31273 AC010285.3-201ENST00000511668 676 ntBASIC4.85□□□□□ -1.63
HOXC8P31273 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms