Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RN7SL690P-201ENST00000582087 240 ntBASIC4.53□□□□□ -1.68
CDH3P22223 AP003117.1-201ENST00000602771 554 ntBASIC4.53□□□□□ -1.68
CDH3P22223 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH3P22223 AL035461.2-201ENST00000619201 524 ntBASIC4.53□□□□□ -1.68
CDH3P22223 AL669942.2-201ENST00000620352 697 ntBASIC4.53□□□□□ -1.68
CDH3P22223 MIR7703-201ENST00000620784 77 ntBASIC4.53□□□□□ -1.68
CDH3P22223 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.53□□□□□ -1.68
CDH3P22223 AC004232.3-201ENST00000622977 525 ntBASIC4.53□□□□□ -1.68
CDH3P22223 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH3P22223 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.53□□□□□ -1.68
CDH3P22223 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CDH3P22223 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
CDH3P22223 ZFRP1-201ENST00000457579 2970 ntBASIC4.53□□□□□ -1.68
CDH3P22223 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CDH3P22223 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH3P22223 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH3P22223 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH3P22223 DHX9P1-201ENST00000436565 3076 ntBASIC4.52□□□□□ -1.69
CDH3P22223 USP9YP4-201ENST00000424401 1745 ntBASIC4.52□□□□□ -1.69
CDH3P22223 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH3P22223 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH3P22223 MFSD8-213ENST00000641134 1327 ntBASIC4.52□□□□□ -1.69
CDH3P22223 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH3P22223 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH3P22223 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH3P22223 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH3P22223 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CDH3P22223 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH3P22223 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH3P22223 RNU6-354P-201ENST00000383862 107 ntBASIC4.52□□□□□ -1.69
CDH3P22223 RNU6-610P-201ENST00000384264 107 ntBASIC4.52□□□□□ -1.69
CDH3P22223 MIR320B1-201ENST00000390209 79 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AL590762.2-201ENST00000395798 571 ntBASIC4.52□□□□□ -1.69
CDH3P22223 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDH3P22223 RPS3AP23-201ENST00000401762 784 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AL024507.1-201ENST00000412741 274 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH3P22223 LINC01347-201ENST00000417964 355 ntBASIC4.52□□□□□ -1.69
CDH3P22223 MTND2P15-201ENST00000418575 892 ntBASIC4.52□□□□□ -1.69
CDH3P22223 VN1R37P-201ENST00000419096 748 ntBASIC4.52□□□□□ -1.69
CDH3P22223 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.52□□□□□ -1.69
CDH3P22223 MTCO1P43-201ENST00000431831 488 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AL035458.1-201ENST00000433096 585 ntBASIC4.52□□□□□ -1.69
CDH3P22223 MTCO1P52-201ENST00000433928 531 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AC006994.1-201ENST00000438212 839 ntBASIC4.52□□□□□ -1.69
CDH3P22223 H2AFZP6-201ENST00000444403 394 ntBASIC4.52□□□□□ -1.69
CDH3P22223 MRPL48P1-201ENST00000445390 636 ntBASIC4.52□□□□□ -1.69
CDH3P22223 CYCSP42-201ENST00000450823 238 ntBASIC4.52□□□□□ -1.69
CDH3P22223 CEACAMP6-201ENST00000452007 574 ntBASIC4.52□□□□□ -1.69
CDH3P22223 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.52□□□□□ -1.69
CDH3P22223 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH3P22223 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH3P22223 AC090142.1-201ENST00000465776 462 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AC010683.1-201ENST00000473673 378 ntBASIC4.52□□□□□ -1.69
CDH3P22223 RN7SL41P-201ENST00000476144 297 ntBASIC4.52□□□□□ -1.69
CDH3P22223 RN7SL459P-201ENST00000481078 302 ntBASIC4.52□□□□□ -1.69
CDH3P22223 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH3P22223 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH3P22223 RPS4XP18-201ENST00000495480 763 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AC119751.4-201ENST00000507498 357 ntBASIC4.52□□□□□ -1.69
CDH3P22223 MTATP6P9-201ENST00000515039 680 ntBASIC4.52□□□□□ -1.69
CDH3P22223 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH3P22223 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH3P22223 RN7SKP92-201ENST00000517266 244 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.52□□□□□ -1.69
CDH3P22223 HIGD1AP5-201ENST00000529959 259 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH3P22223 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH3P22223 AC087477.6-201ENST00000559595 843 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AL109741.3-201ENST00000561748 592 ntBASIC4.52□□□□□ -1.69
CDH3P22223 OR1AB1P-201ENST00000585564 761 ntBASIC4.52□□□□□ -1.69
CDH3P22223 HMGB2P1-201ENST00000591146 634 ntBASIC4.52□□□□□ -1.69
CDH3P22223 VN1R84P-201ENST00000593697 235 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AC021851.1-201ENST00000608537 1082 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AF129408.1-201ENST00000608767 431 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AC009269.6-201ENST00000621778 588 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH3P22223 AC006971.1-201ENST00000407916 4486 ntBASIC4.52□□□□□ -1.69
CDH3P22223 AC108467.2-201ENST00000617640 1597 ntBASIC4.52□□□□□ -1.69
CDH3P22223 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH3P22223 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH3P22223 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH3P22223 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.52□□□□□ -1.69
CDH3P22223 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.51□□□□□ -1.69
CDH3P22223 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CDH3P22223 CCT8P1-201ENST00000413611 1657 ntBASIC4.51□□□□□ -1.69
CDH3P22223 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
CDH3P22223 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDH3P22223 OR11H5P-202ENST00000641612 1325 ntBASIC4.51□□□□□ -1.69
CDH3P22223 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CDH3P22223 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 OR4K15-201ENST00000305051 1216 ntBASIC4.51□□□□□ -1.69
CDH3P22223 RNU6-666P-201ENST00000363499 107 ntBASIC4.51□□□□□ -1.69
CDH3P22223 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms