Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC015722.2-201ENST00000622210 551 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 AC009093.8-201ENST00000641769 292 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGA1P17096 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGA1P17096 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGA1P17096 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGA1P17096 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.96□□□□□ -1.77
HMGA1P17096 OR51C1P-202ENST00000641159 1444 ntBASIC3.96□□□□□ -1.77
HMGA1P17096 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
HMGA1P17096 RNA5SP52-201ENST00000362448 134 ntBASIC3.96□□□□□ -1.78
HMGA1P17096 RNA5SP51-201ENST00000364750 119 ntBASIC3.96□□□□□ -1.78
HMGA1P17096 AL160275.2-201ENST00000412010 394 ntBASIC3.96□□□□□ -1.78
HMGA1P17096 AC010740.1-201ENST00000417035 684 ntBASIC3.96□□□□□ -1.78
HMGA1P17096 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HMGA1P17096 AC011742.1-201ENST00000431448 434 ntBASIC3.96□□□□□ -1.78
HMGA1P17096 snoU13.22-201ENST00000459428 104 ntBASIC3.96□□□□□ -1.78
HMGA1P17096 AC006499.5-201ENST00000505037 514 ntBASIC3.96□□□□□ -1.78
HMGA1P17096 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.96□□□□□ -1.78
HMGA1P17096 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.96□□□□□ -1.78
HMGA1P17096 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
HMGA1P17096 OR7A8P-201ENST00000595427 913 ntBASIC3.96□□□□□ -1.78
HMGA1P17096 AC018690.1-201ENST00000608144 626 ntBASIC3.96□□□□□ -1.78
HMGA1P17096 AL356121.2-201ENST00000624715 780 ntBASIC3.96□□□□□ -1.78
HMGA1P17096 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGA1P17096 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HMGA1P17096 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HMGA1P17096 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
HMGA1P17096 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGA1P17096 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGA1P17096 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGA1P17096 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGA1P17096 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HMGA1P17096 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGA1P17096 MIR208A-201ENST00000362287 71 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGA1P17096 YME1L1P1-201ENST00000429435 297 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGA1P17096 AC090589.1-201ENST00000473109 362 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 AC084198.1-201ENST00000477747 402 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGA1P17096 AC090877.1-201ENST00000561418 344 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGA1P17096 AL353600.1-201ENST00000608148 251 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 AC009237.17-201ENST00000618111 748 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 AC067931.1-201ENST00000624190 671 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 AC004777.1-201ENST00000624317 287 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGA1P17096 ZNF962P-201ENST00000443465 3140 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGA1P17096 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGA1P17096 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGA1P17096 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HMGA1P17096 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGA1P17096 UBE3AP2-201ENST00000429033 2259 ntBASIC3.95□□□□□ -1.78
HMGA1P17096 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HMGA1P17096 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGA1P17096 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HMGA1P17096 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGA1P17096 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGA1P17096 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGA1P17096 MIR513A2-201ENST00000385249 127 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGA1P17096 OR2X1P-201ENST00000421144 687 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AC092447.2-201ENST00000435487 669 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 ELOCP8-201ENST00000439309 332 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 ELOCP15-201ENST00000442090 332 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGA1P17096 AL451050.1-201ENST00000450126 415 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGA1P17096 AC018635.1-201ENST00000468292 1030 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGA1P17096 AC104619.4-201ENST00000510773 249 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGA1P17096 RNA5SP208-201ENST00000516156 78 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AC008802.1-201ENST00000519121 791 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGA1P17096 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGA1P17096 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGA1P17096 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGA1P17096 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGA1P17096 AC006272.2-201ENST00000594725 163 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGA1P17096 AL354760.1-201ENST00000608357 643 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AC069200.1-201ENST00000609511 323 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AC128687.2-201ENST00000609657 566 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AC244100.1-202ENST00000621554 382 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AC079298.2-201ENST00000623885 459 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 AC020978.9-201ENST00000624380 1141 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGA1P17096 ATE1-AS1-202ENST00000636460 506 ntBASIC3.94□□□□□ -1.78
HMGA1P17096 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HMGA1P17096 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGA1P17096 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGA1P17096 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGA1P17096 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGA1P17096 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
HMGA1P17096 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGA1P17096 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HMGA1P17096 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms