Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SNORA59A-201ENST00000459326 152 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 HSPD1P15-201ENST00000505573 1122 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A1P12107 MTND6P33-201ENST00000571794 183 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.35□□□□□ -1.71
COL11A1P12107 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.35□□□□□ -1.71
COL11A1P12107 AC138627.1-204ENST00000641894 765 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 AC074029.4-201ENST00000624796 1859 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
COL11A1P12107 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
COL11A1P12107 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A1P12107 MFSD8-236ENST00000641509 4050 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.35□□□□□ -1.71
COL11A1P12107 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.35□□□□□ -1.71
COL11A1P12107 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A1P12107 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.35□□□□□ -1.71
COL11A1P12107 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A1P12107 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
COL11A1P12107 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A1P12107 RPL5P30-201ENST00000465511 891 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 SETP14-201ENST00000497538 873 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 TRAV15-201ENST00000556680 249 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.35□□□□□ -1.71
COL11A1P12107 VN1R92P-201ENST00000598511 928 ntBASIC4.35□□□□□ -1.71
COL11A1P12107 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.35□□□□□ -1.71
COL11A1P12107 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.35□□□□□ -1.71
COL11A1P12107 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A1P12107 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COL11A1P12107 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
COL11A1P12107 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
COL11A1P12107 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL11A1P12107 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL11A1P12107 AC008079.2-201ENST00000623543 20396 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL11A1P12107 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL11A1P12107 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL11A1P12107 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
COL11A1P12107 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL11A1P12107 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.34□□□□□ -1.71
COL11A1P12107 IL6STP1-201ENST00000346911 1020 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 RPL7P60-201ENST00000397636 735 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 TMX2P1-201ENST00000436507 708 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 AC026427.2-201ENST00000506228 536 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 RAC1P2-201ENST00000511164 579 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 TCP11X3P-202ENST00000514289 1254 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 FTH1P11-201ENST00000517577 551 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 OR7E13P-201ENST00000526052 910 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 AP000889.1-201ENST00000530968 660 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 MIR3922-201ENST00000585192 84 ntBASIC4.34□□□□□ -1.71
COL11A1P12107 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.34□□□□□ -1.71
COL11A1P12107 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.34□□□□□ -1.71
COL11A1P12107 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.34□□□□□ -1.71
COL11A1P12107 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.34□□□□□ -1.72
COL11A1P12107 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.72
COL11A1P12107 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.34□□□□□ -1.72
COL11A1P12107 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL11A1P12107 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A1P12107 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A1P12107 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A1P12107 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.33□□□□□ -1.72
COL11A1P12107 RNA5SP72-201ENST00000364442 117 ntBASIC4.33□□□□□ -1.72
COL11A1P12107 AL591419.1-201ENST00000427423 339 ntBASIC4.33□□□□□ -1.72
COL11A1P12107 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.33□□□□□ -1.72
COL11A1P12107 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.33□□□□□ -1.72
COL11A1P12107 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.33□□□□□ -1.72
COL11A1P12107 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.33□□□□□ -1.72
COL11A1P12107 AL133162.1-201ENST00000463228 453 ntBASIC4.33□□□□□ -1.72
COL11A1P12107 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.33□□□□□ -1.72
COL11A1P12107 RN7SL293P-201ENST00000481765 281 ntBASIC4.33□□□□□ -1.72
COL11A1P12107 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.33□□□□□ -1.72
COL11A1P12107 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.33□□□□□ -1.72
COL11A1P12107 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.33□□□□□ -1.72
COL11A1P12107 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.33□□□□□ -1.72
COL11A1P12107 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.33□□□□□ -1.72
COL11A1P12107 AC011471.1-201ENST00000585766 187 ntBASIC4.33□□□□□ -1.72
COL11A1P12107 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A1P12107 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
COL11A1P12107 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.33□□□□□ -1.72
COL11A1P12107 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A1P12107 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL11A1P12107 RPL7AP73-201ENST00000413490 353 ntBASIC4.32□□□□□ -1.72
COL11A1P12107 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.32□□□□□ -1.72
COL11A1P12107 AC084198.1-201ENST00000477747 402 ntBASIC4.32□□□□□ -1.72
COL11A1P12107 AC005726.1-201ENST00000494679 427 ntBASIC4.32□□□□□ -1.72
COL11A1P12107 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.32□□□□□ -1.72
COL11A1P12107 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.32□□□□□ -1.72
COL11A1P12107 AC037471.2-201ENST00000564941 598 ntBASIC4.32□□□□□ -1.72
COL11A1P12107 AC096553.1-201ENST00000605169 829 ntBASIC4.32□□□□□ -1.72
COL11A1P12107 AL355365.1-201ENST00000616480 294 ntBASIC4.32□□□□□ -1.72
COL11A1P12107 AC018816.2-201ENST00000621460 353 ntBASIC4.32□□□□□ -1.72
COL11A1P12107 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.32□□□□□ -1.72
COL11A1P12107 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL11A1P12107 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
COL11A1P12107 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL11A1P12107 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL11A1P12107 AC007823.1-201ENST00000569932 1566 ntBASIC4.32□□□□□ -1.72
COL11A1P12107 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL11A1P12107 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.32□□□□□ -1.72
COL11A1P12107 AC027290.2-201ENST00000623210 18662 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms