Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC010683.1-201ENST00000473673 378 ntBASIC4.49□□□□□ -1.69
TPM1P09493 RN7SL810P-201ENST00000493031 276 ntBASIC4.49□□□□□ -1.69
TPM1P09493 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.49□□□□□ -1.69
TPM1P09493 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
TPM1P09493 KCTD9P2-201ENST00000512203 1013 ntBASIC4.49□□□□□ -1.69
TPM1P09493 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.49□□□□□ -1.69
TPM1P09493 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.49□□□□□ -1.69
TPM1P09493 AC044860.2-201ENST00000561005 179 ntBASIC4.49□□□□□ -1.69
TPM1P09493 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.49□□□□□ -1.69
TPM1P09493 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.49□□□□□ -1.69
TPM1P09493 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TPM1P09493 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.49□□□□□ -1.69
TPM1P09493 AL445363.3-201ENST00000623080 671 ntBASIC4.49□□□□□ -1.69
TPM1P09493 AL139811.1-201ENST00000424779 2299 ntBASIC4.49□□□□□ -1.69
TPM1P09493 AC106871.1-201ENST00000568324 3102 ntBASIC4.49□□□□□ -1.69
TPM1P09493 AC090229.1-201ENST00000590983 1609 ntBASIC4.49□□□□□ -1.69
TPM1P09493 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TPM1P09493 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.49□□□□□ -1.69
TPM1P09493 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.48□□□□□ -1.69
TPM1P09493 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
TPM1P09493 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TPM1P09493 EIF2AP4-201ENST00000424793 1781 ntBASIC4.48□□□□□ -1.69
TPM1P09493 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TPM1P09493 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.48□□□□□ -1.69
TPM1P09493 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TPM1P09493 SNORD35B-201ENST00000363660 87 ntBASIC4.48□□□□□ -1.69
TPM1P09493 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TPM1P09493 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TPM1P09493 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.48□□□□□ -1.69
TPM1P09493 AC006065.1-201ENST00000422539 802 ntBASIC4.48□□□□□ -1.69
TPM1P09493 NPM1P24-201ENST00000428039 894 ntBASIC4.48□□□□□ -1.69
TPM1P09493 FTH1P16-201ENST00000435241 552 ntBASIC4.48□□□□□ -1.69
TPM1P09493 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TPM1P09493 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.48□□□□□ -1.69
TPM1P09493 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
TPM1P09493 AC068305.1-201ENST00000497406 726 ntBASIC4.48□□□□□ -1.69
TPM1P09493 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.48□□□□□ -1.69
TPM1P09493 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.48□□□□□ -1.69
TPM1P09493 HPRT1P2-201ENST00000505250 544 ntBASIC4.48□□□□□ -1.69
TPM1P09493 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.48□□□□□ -1.69
TPM1P09493 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.48□□□□□ -1.69
TPM1P09493 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.48□□□□□ -1.69
TPM1P09493 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.48□□□□□ -1.69
TPM1P09493 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TPM1P09493 AC105233.3-201ENST00000531125 744 ntBASIC4.48□□□□□ -1.69
TPM1P09493 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.48□□□□□ -1.69
TPM1P09493 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.48□□□□□ -1.69
TPM1P09493 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.48□□□□□ -1.69
TPM1P09493 AC123768.4-201ENST00000616244 701 ntBASIC4.48□□□□□ -1.69
TPM1P09493 MIR6729-201ENST00000618194 65 ntBASIC4.48□□□□□ -1.69
TPM1P09493 AC018445.2-201ENST00000622987 260 ntBASIC4.48□□□□□ -1.69
TPM1P09493 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.48□□□□□ -1.69
TPM1P09493 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TPM1P09493 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TPM1P09493 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TPM1P09493 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TPM1P09493 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TPM1P09493 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.47□□□□□ -1.69
TPM1P09493 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
TPM1P09493 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
TPM1P09493 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.47□□□□□ -1.69
TPM1P09493 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.47□□□□□ -1.69
TPM1P09493 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.47□□□□□ -1.69
TPM1P09493 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TPM1P09493 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.47□□□□□ -1.69
TPM1P09493 BX510359.3-201ENST00000422168 306 ntBASIC4.47□□□□□ -1.69
TPM1P09493 RPS26P40-201ENST00000435209 294 ntBASIC4.47□□□□□ -1.69
TPM1P09493 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.47□□□□□ -1.69
TPM1P09493 RPL21P71-201ENST00000465598 459 ntBASIC4.47□□□□□ -1.69
TPM1P09493 AC109327.1-201ENST00000471666 403 ntBASIC4.47□□□□□ -1.69
TPM1P09493 AF213884.1-201ENST00000488102 463 ntBASIC4.47□□□□□ -1.69
TPM1P09493 RPL35P6-201ENST00000490024 372 ntBASIC4.47□□□□□ -1.69
TPM1P09493 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.47□□□□□ -1.69
TPM1P09493 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.47□□□□□ -1.69
TPM1P09493 RNA5SP519-201ENST00000516480 119 ntBASIC4.47□□□□□ -1.69
TPM1P09493 RNU7-143P-201ENST00000516781 65 ntBASIC4.47□□□□□ -1.69
TPM1P09493 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.47□□□□□ -1.69
TPM1P09493 OR7E18P-201ENST00000592589 702 ntBASIC4.47□□□□□ -1.69
TPM1P09493 VN1R79P-201ENST00000593540 513 ntBASIC4.47□□□□□ -1.69
TPM1P09493 AL034351.1-201ENST00000605288 668 ntBASIC4.47□□□□□ -1.69
TPM1P09493 AC010857.1-201ENST00000606398 594 ntBASIC4.47□□□□□ -1.69
TPM1P09493 AC090948.1-201ENST00000607464 549 ntBASIC4.47□□□□□ -1.69
TPM1P09493 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.47□□□□□ -1.69
TPM1P09493 AP000843.1-201ENST00000624880 701 ntBASIC4.47□□□□□ -1.69
TPM1P09493 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.47□□□□□ -1.69
TPM1P09493 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.47□□□□□ -1.69
TPM1P09493 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TPM1P09493 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.47□□□□□ -1.69
TPM1P09493 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.47□□□□□ -1.69
TPM1P09493 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.47□□□□□ -1.69
TPM1P09493 MFSD8-220ENST00000641243 1422 ntBASIC4.46□□□□□ -1.69
TPM1P09493 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TPM1P09493 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TPM1P09493 AL136964.1-201ENST00000622038 2990 ntBASIC4.46□□□□□ -1.7
TPM1P09493 SPATA2P1-201ENST00000431223 2055 ntBASIC4.46□□□□□ -1.7
TPM1P09493 RNU1-18P-201ENST00000363062 164 ntBASIC4.46□□□□□ -1.7
TPM1P09493 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TPM1P09493 AL035696.2-201ENST00000407941 709 ntBASIC4.46□□□□□ -1.7
TPM1P09493 RNA5SP239-201ENST00000410218 129 ntBASIC4.46□□□□□ -1.7
TPM1P09493 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms