Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CD48P09326 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CD48P09326 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.46□□□□□ -1.7
CD48P09326 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.46□□□□□ -1.7
CD48P09326 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
CD48P09326 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CD48P09326 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.46□□□□□ -1.7
CD48P09326 RNU6-252P-201ENST00000363232 107 ntBASIC4.46□□□□□ -1.7
CD48P09326 RNA5SP175-201ENST00000364275 119 ntBASIC4.46□□□□□ -1.7
CD48P09326 MIR192-201ENST00000384915 110 ntBASIC4.46□□□□□ -1.7
CD48P09326 RPL22P22-201ENST00000395439 379 ntBASIC4.46□□□□□ -1.7
CD48P09326 RNA5SP104-201ENST00000410989 118 ntBASIC4.46□□□□□ -1.7
CD48P09326 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.46□□□□□ -1.7
CD48P09326 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.46□□□□□ -1.7
CD48P09326 TCEA1P2-201ENST00000420496 906 ntBASIC4.46□□□□□ -1.7
CD48P09326 HLA-N-201ENST00000437516 135 ntBASIC4.46□□□□□ -1.7
CD48P09326 AC006994.1-201ENST00000438212 839 ntBASIC4.46□□□□□ -1.7
CD48P09326 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.46□□□□□ -1.7
CD48P09326 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.46□□□□□ -1.7
CD48P09326 RPL7P55-201ENST00000450522 746 ntBASIC4.46□□□□□ -1.7
CD48P09326 HMGB1P26-201ENST00000452520 628 ntBASIC4.46□□□□□ -1.7
CD48P09326 AC104164.3-201ENST00000467363 1258 ntBASIC4.46□□□□□ -1.7
CD48P09326 RPS17P11-201ENST00000474297 293 ntBASIC4.46□□□□□ -1.7
CD48P09326 SYT14P1-201ENST00000481459 721 ntBASIC4.46□□□□□ -1.7
CD48P09326 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.46□□□□□ -1.7
CD48P09326 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.46□□□□□ -1.7
CD48P09326 AC025674.1-201ENST00000507074 324 ntBASIC4.46□□□□□ -1.7
CD48P09326 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.46□□□□□ -1.7
CD48P09326 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.46□□□□□ -1.7
CD48P09326 HMGB3P13-201ENST00000511263 607 ntBASIC4.46□□□□□ -1.7
CD48P09326 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.46□□□□□ -1.7
CD48P09326 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.46□□□□□ -1.7
CD48P09326 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CD48P09326 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.46□□□□□ -1.7
CD48P09326 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.46□□□□□ -1.7
CD48P09326 AL109766.1-201ENST00000555080 552 ntBASIC4.46□□□□□ -1.7
CD48P09326 AC104229.1-201ENST00000561364 255 ntBASIC4.46□□□□□ -1.7
CD48P09326 AC011492.1-201ENST00000600023 315 ntBASIC4.46□□□□□ -1.7
CD48P09326 AC069431.2-201ENST00000604149 1099 ntBASIC4.46□□□□□ -1.7
CD48P09326 AC090948.1-201ENST00000607464 549 ntBASIC4.46□□□□□ -1.7
CD48P09326 uc_338.13-201ENST00000618243 179 ntBASIC4.46□□□□□ -1.7
CD48P09326 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CD48P09326 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.46□□□□□ -1.7
CD48P09326 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CD48P09326 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.46□□□□□ -1.7
CD48P09326 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CD48P09326 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CD48P09326 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CD48P09326 AC008432.1-201ENST00000615912 1320 ntBASIC4.46□□□□□ -1.7
CD48P09326 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CD48P09326 A2MP1-204ENST00000566278 4130 ntBASIC4.45□□□□□ -1.7
CD48P09326 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CD48P09326 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CD48P09326 RNU5E-10P-201ENST00000363506 118 ntBASIC4.45□□□□□ -1.7
CD48P09326 OR13C3-201ENST00000374781 1108 ntBASIC4.45□□□□□ -1.7
CD48P09326 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.45□□□□□ -1.7
CD48P09326 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CD48P09326 AL355615.1-201ENST00000406187 641 ntBASIC4.45□□□□□ -1.7
CD48P09326 SNORA11F-201ENST00000408237 128 ntBASIC4.45□□□□□ -1.7
CD48P09326 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.45□□□□□ -1.7
CD48P09326 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CD48P09326 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
CD48P09326 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.45□□□□□ -1.7
CD48P09326 UBE2V1P9-201ENST00000414760 368 ntBASIC4.45□□□□□ -1.7
CD48P09326 RPL26P29-201ENST00000415623 438 ntBASIC4.45□□□□□ -1.7
CD48P09326 RPS23P10-201ENST00000416185 486 ntBASIC4.45□□□□□ -1.7
CD48P09326 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.45□□□□□ -1.7
CD48P09326 OR51A6P-201ENST00000418680 1004 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC004552.1-201ENST00000419089 348 ntBASIC4.45□□□□□ -1.7
CD48P09326 MFSD13B-201ENST00000420133 1290 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.45□□□□□ -1.7
CD48P09326 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.45□□□□□ -1.7
CD48P09326 MTCO2P23-201ENST00000425216 680 ntBASIC4.45□□□□□ -1.7
CD48P09326 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.45□□□□□ -1.7
CD48P09326 PHBP16-201ENST00000446318 950 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC104306.1-201ENST00000449702 371 ntBASIC4.45□□□□□ -1.7
CD48P09326 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.45□□□□□ -1.7
CD48P09326 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.45□□□□□ -1.7
CD48P09326 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.45□□□□□ -1.7
CD48P09326 NDUFA12P1-201ENST00000455914 406 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.45□□□□□ -1.7
CD48P09326 RN7SL98P-201ENST00000462271 300 ntBASIC4.45□□□□□ -1.7
CD48P09326 RPS26P3-201ENST00000470205 348 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC090543.2-201ENST00000483963 348 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC004057.1-201ENST00000485827 348 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC013356.1-201ENST00000489027 564 ntBASIC4.45□□□□□ -1.7
CD48P09326 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.45□□□□□ -1.7
CD48P09326 OR5H3P-201ENST00000502817 919 ntBASIC4.45□□□□□ -1.7
CD48P09326 SUMO2P4-201ENST00000504193 276 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC098862.1-201ENST00000504991 413 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.45□□□□□ -1.7
CD48P09326 AC010376.1-201ENST00000522101 334 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC006064.5-201ENST00000541782 248 ntBASIC4.45□□□□□ -1.7
CD48P09326 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.45□□□□□ -1.7
CD48P09326 CBX3P2-202ENST00000583365 535 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.45□□□□□ -1.7
CD48P09326 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.45□□□□□ -1.7
CD48P09326 AC112220.2-201ENST00000605513 533 ntBASIC4.45□□□□□ -1.7
CD48P09326 AL031666.3-201ENST00000609320 1006 ntBASIC4.45□□□□□ -1.7
CD48P09326 RNU6-1192P-201ENST00000612197 107 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms