Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RB1P06400 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RB1P06400 RNU6-543P-201ENST00000362576 108 ntBASIC4.92□□□□□ -1.62
RB1P06400 RNA5SP366-201ENST00000365454 123 ntBASIC4.92□□□□□ -1.62
RB1P06400 AL590290.1-201ENST00000405336 380 ntBASIC4.92□□□□□ -1.62
RB1P06400 RPL21P108-201ENST00000413857 481 ntBASIC4.92□□□□□ -1.62
RB1P06400 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.92□□□□□ -1.62
RB1P06400 TMSB10P2-201ENST00000416049 131 ntBASIC4.92□□□□□ -1.62
RB1P06400 AC073136.2-201ENST00000417282 849 ntBASIC4.92□□□□□ -1.62
RB1P06400 RPL36AP36-201ENST00000418616 301 ntBASIC4.92□□□□□ -1.62
RB1P06400 AC013429.2-201ENST00000418798 781 ntBASIC4.92□□□□□ -1.62
RB1P06400 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.92□□□□□ -1.62
RB1P06400 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.92□□□□□ -1.62
RB1P06400 AC013262.1-201ENST00000426710 252 ntBASIC4.92□□□□□ -1.62
RB1P06400 DEFB130D-201ENST00000426866 237 ntBASIC4.92□□□□□ -1.62
RB1P06400 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.92□□□□□ -1.62
RB1P06400 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.92□□□□□ -1.62
RB1P06400 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.92□□□□□ -1.62
RB1P06400 AC092013.1-201ENST00000438795 332 ntBASIC4.92□□□□□ -1.62
RB1P06400 HMGB3P9-201ENST00000441799 583 ntBASIC4.92□□□□□ -1.62
RB1P06400 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.92□□□□□ -1.62
RB1P06400 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.92□□□□□ -1.62
RB1P06400 RPS6P2-201ENST00000454208 705 ntBASIC4.92□□□□□ -1.62
RB1P06400 AC010374.1-201ENST00000503762 1237 ntBASIC4.92□□□□□ -1.62
RB1P06400 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.92□□□□□ -1.62
RB1P06400 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.92□□□□□ -1.62
RB1P06400 RPL23AP53-201ENST00000521854 457 ntBASIC4.92□□□□□ -1.62
RB1P06400 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
RB1P06400 AC104115.2-201ENST00000523026 687 ntBASIC4.92□□□□□ -1.62
RB1P06400 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RB1P06400 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.92□□□□□ -1.62
RB1P06400 AC027104.1-201ENST00000563702 681 ntBASIC4.92□□□□□ -1.62
RB1P06400 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.92□□□□□ -1.62
RB1P06400 RN7SL622P-201ENST00000585292 275 ntBASIC4.92□□□□□ -1.62
RB1P06400 CCDC58P3-201ENST00000590792 430 ntBASIC4.92□□□□□ -1.62
RB1P06400 PSMA6P4-201ENST00000603247 718 ntBASIC4.92□□□□□ -1.62
RB1P06400 STMN1P1-201ENST00000617809 440 ntBASIC4.92□□□□□ -1.62
RB1P06400 RNA5SP196-201ENST00000625967 102 ntBASIC4.92□□□□□ -1.62
RB1P06400 MIR492-201ENST00000638676 116 ntBASIC4.92□□□□□ -1.62
RB1P06400 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RB1P06400 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
RB1P06400 AC083843.3-201ENST00000623679 2186 ntBASIC4.92□□□□□ -1.62
RB1P06400 AC063976.2-201ENST00000425667 3556 ntBASIC4.92□□□□□ -1.62
RB1P06400 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.92□□□□□ -1.62
RB1P06400 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.92□□□□□ -1.62
RB1P06400 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.92□□□□□ -1.62
RB1P06400 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RB1P06400 MTND4P31-201ENST00000425607 1343 ntBASIC4.92□□□□□ -1.62
RB1P06400 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RB1P06400 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RB1P06400 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RB1P06400 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RB1P06400 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.91□□□□□ -1.62
RB1P06400 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RB1P06400 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RB1P06400 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RB1P06400 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RB1P06400 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 AC019155.1-201ENST00000382242 574 ntBASIC4.91□□□□□ -1.62
RB1P06400 RNU6-207P-201ENST00000384137 107 ntBASIC4.91□□□□□ -1.62
RB1P06400 RPL32P23-201ENST00000397237 405 ntBASIC4.91□□□□□ -1.62
RB1P06400 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.91□□□□□ -1.62
RB1P06400 RPL23AP26-201ENST00000412728 464 ntBASIC4.91□□□□□ -1.62
RB1P06400 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.91□□□□□ -1.62
RB1P06400 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.91□□□□□ -1.62
RB1P06400 AC104333.2-201ENST00000422630 192 ntBASIC4.91□□□□□ -1.62
RB1P06400 RPS26P47-201ENST00000427219 348 ntBASIC4.91□□□□□ -1.62
RB1P06400 BMS1P19-201ENST00000433925 393 ntBASIC4.91□□□□□ -1.62
RB1P06400 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.91□□□□□ -1.62
RB1P06400 RPL35AP21-201ENST00000437667 333 ntBASIC4.91□□□□□ -1.62
RB1P06400 AL645931.1-201ENST00000439737 410 ntBASIC4.91□□□□□ -1.62
RB1P06400 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.91□□□□□ -1.62
RB1P06400 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.91□□□□□ -1.62
RB1P06400 MRPL35P2-201ENST00000448009 511 ntBASIC4.91□□□□□ -1.62
RB1P06400 AL935212.3-201ENST00000450729 284 ntBASIC4.91□□□□□ -1.62
RB1P06400 APOOP2-201ENST00000461561 539 ntBASIC4.91□□□□□ -1.62
RB1P06400 CCDC75P1-201ENST00000469247 791 ntBASIC4.91□□□□□ -1.62
RB1P06400 UBA52P3-201ENST00000491303 382 ntBASIC4.91□□□□□ -1.62
RB1P06400 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.91□□□□□ -1.62
RB1P06400 NIFKP7-201ENST00000503365 834 ntBASIC4.91□□□□□ -1.62
RB1P06400 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.91□□□□□ -1.62
RB1P06400 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.91□□□□□ -1.62
RB1P06400 MED28P5-201ENST00000528254 438 ntBASIC4.91□□□□□ -1.62
RB1P06400 AP003066.2-201ENST00000529375 555 ntBASIC4.91□□□□□ -1.62
RB1P06400 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RB1P06400 AC006518.1-201ENST00000541449 943 ntBASIC4.91□□□□□ -1.62
RB1P06400 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RB1P06400 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.91□□□□□ -1.62
RB1P06400 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.91□□□□□ -1.62
RB1P06400 AC034105.4-201ENST00000568304 277 ntBASIC4.91□□□□□ -1.62
RB1P06400 AC122134.1-202ENST00000569111 1201 ntBASIC4.91□□□□□ -1.62
RB1P06400 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.91□□□□□ -1.62
RB1P06400 AL139022.2-201ENST00000606934 443 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms