Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PDGFAP04085 AL359694.1-201ENST00000403247 604 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AL356421.1-201ENST00000403255 413 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AL122016.1-201ENST00000403365 367 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AL024474.1-201ENST00000404655 591 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 SNORA11B-201ENST00000408175 129 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AL807761.1-201ENST00000417622 171 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 NCOR1P3-201ENST00000420479 303 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.21□□□□□ -1.42
PDGFAP04085 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFAP04085 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 MTCO3P46-201ENST00000425787 232 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 RPL36P19-201ENST00000430744 301 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFAP04085 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.21□□□□□ -1.42
PDGFAP04085 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.21□□□□□ -1.42
PDGFAP04085 AC007679.3-201ENST00000434035 414 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AL049734.2-201ENST00000441066 616 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFAP04085 SNRPBP1-201ENST00000443634 282 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 MRPL50P4-201ENST00000446432 475 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFAP04085 SLC25A18P1-201ENST00000449385 454 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 RPL31P15-201ENST00000449770 338 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AL121877.1-201ENST00000453704 622 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 Z83838.1-202ENST00000456225 839 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 RN7SL39P-201ENST00000462264 297 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFAP04085 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFAP04085 AC091849.1-201ENST00000509920 121 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFAP04085 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFAP04085 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.21□□□□□ -1.42
PDGFAP04085 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFAP04085 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFAP04085 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFAP04085 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFAP04085 AC026956.1-201ENST00000558741 396 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFAP04085 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFAP04085 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFAP04085 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFAP04085 AC091133.5-201ENST00000603088 301 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 SNORD96A-201ENST00000606577 79 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 MIR6729-201ENST00000618194 65 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 AC233309.1-201ENST00000619522 751 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 RMST_7.1-201ENST00000621935 268 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.21□□□□□ -1.42
PDGFAP04085 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.21□□□□□ -1.42
PDGFAP04085 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.21□□□□□ -1.42
PDGFAP04085 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFAP04085 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFAP04085 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFAP04085 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFAP04085 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFAP04085 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PDGFAP04085 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
PDGFAP04085 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PDGFAP04085 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFAP04085 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 NACAP2-201ENST00000318548 624 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 RNU6-74P-201ENST00000384235 107 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 MIR199B-201ENST00000384849 110 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 RNU6-510P-201ENST00000391239 108 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 RPL31P52-201ENST00000407532 367 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFAP04085 AC006548.1-201ENST00000427470 102 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFAP04085 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 AC233279.1-201ENST00000455300 423 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 RNU7-63P-201ENST00000459054 62 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFAP04085 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFAP04085 AC026427.2-201ENST00000506228 536 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 RNU7-30P-201ENST00000516835 62 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms