Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL133244.1-201ENST00000456007 258 ntBASIC4.51□□□□□ -1.69
MSH4O15457 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.51□□□□□ -1.69
MSH4O15457 AC020898.1-201ENST00000474167 787 ntBASIC4.51□□□□□ -1.69
MSH4O15457 AC110792.1-201ENST00000491826 472 ntBASIC4.51□□□□□ -1.69
MSH4O15457 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.51□□□□□ -1.69
MSH4O15457 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.51□□□□□ -1.69
MSH4O15457 OR5M7P-201ENST00000526140 972 ntBASIC4.51□□□□□ -1.69
MSH4O15457 YPEL5P3-201ENST00000547227 352 ntBASIC4.51□□□□□ -1.69
MSH4O15457 AC091516.1-201ENST00000549191 703 ntBASIC4.51□□□□□ -1.69
MSH4O15457 AGGF1P6-201ENST00000569213 976 ntBASIC4.51□□□□□ -1.69
MSH4O15457 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.51□□□□□ -1.69
MSH4O15457 RN7SL703P-201ENST00000578485 302 ntBASIC4.51□□□□□ -1.69
MSH4O15457 AC019131.2-201ENST00000609071 870 ntBASIC4.51□□□□□ -1.69
MSH4O15457 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.51□□□□□ -1.69
MSH4O15457 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.51□□□□□ -1.69
MSH4O15457 FAM91A3P-201ENST00000456826 2544 ntBASIC4.51□□□□□ -1.69
MSH4O15457 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MSH4O15457 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MSH4O15457 HSPA8P17-201ENST00000427029 1382 ntBASIC4.51□□□□□ -1.69
MSH4O15457 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
MSH4O15457 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSH4O15457 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.5□□□□□ -1.69
MSH4O15457 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
MSH4O15457 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
MSH4O15457 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
MSH4O15457 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
MSH4O15457 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
MSH4O15457 BMS1P3-201ENST00000372011 932 ntBASIC4.5□□□□□ -1.69
MSH4O15457 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.5□□□□□ -1.69
MSH4O15457 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
MSH4O15457 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.5□□□□□ -1.69
MSH4O15457 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSH4O15457 AL034403.1-201ENST00000399414 885 ntBASIC4.5□□□□□ -1.69
MSH4O15457 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.5□□□□□ -1.69
MSH4O15457 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.5□□□□□ -1.69
MSH4O15457 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.5□□□□□ -1.69
MSH4O15457 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MSH4O15457 EIF4EP1-201ENST00000422311 642 ntBASIC4.5□□□□□ -1.69
MSH4O15457 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.5□□□□□ -1.69
MSH4O15457 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.5□□□□□ -1.69
MSH4O15457 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.5□□□□□ -1.69
MSH4O15457 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MSH4O15457 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.5□□□□□ -1.69
MSH4O15457 AL591363.1-201ENST00000450091 483 ntBASIC4.5□□□□□ -1.69
MSH4O15457 AC002553.2-201ENST00000453217 340 ntBASIC4.5□□□□□ -1.69
MSH4O15457 RPL7AP28-201ENST00000464513 571 ntBASIC4.5□□□□□ -1.69
MSH4O15457 AC037198.2-201ENST00000478845 733 ntBASIC4.5□□□□□ -1.69
MSH4O15457 RN7SL271P-201ENST00000487601 295 ntBASIC4.5□□□□□ -1.69
MSH4O15457 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.5□□□□□ -1.69
MSH4O15457 AC010460.1-201ENST00000507087 466 ntBASIC4.5□□□□□ -1.69
MSH4O15457 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.5□□□□□ -1.69
MSH4O15457 AC026402.1-201ENST00000513642 170 ntBASIC4.5□□□□□ -1.69
MSH4O15457 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.5□□□□□ -1.69
MSH4O15457 RNA5SP179-201ENST00000517284 121 ntBASIC4.5□□□□□ -1.69
MSH4O15457 AC104997.1-201ENST00000519761 717 ntBASIC4.5□□□□□ -1.69
MSH4O15457 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.5□□□□□ -1.69
MSH4O15457 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
MSH4O15457 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSH4O15457 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.5□□□□□ -1.69
MSH4O15457 CD24P2-201ENST00000565486 219 ntBASIC4.5□□□□□ -1.69
MSH4O15457 AC053481.4-201ENST00000583164 216 ntBASIC4.5□□□□□ -1.69
MSH4O15457 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.5□□□□□ -1.69
MSH4O15457 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.5□□□□□ -1.69
MSH4O15457 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.5□□□□□ -1.69
MSH4O15457 AC091167.4-201ENST00000605079 184 ntBASIC4.5□□□□□ -1.69
MSH4O15457 AL773545.4-201ENST00000637262 310 ntBASIC4.5□□□□□ -1.69
MSH4O15457 AL513478.4-201ENST00000641636 310 ntBASIC4.5□□□□□ -1.69
MSH4O15457 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MSH4O15457 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
MSH4O15457 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSH4O15457 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSH4O15457 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSH4O15457 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
MSH4O15457 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH4O15457 MAPK10-349ENST00000641767 3661 ntBASIC4.49□□□□□ -1.69
MSH4O15457 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSH4O15457 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.49□□□□□ -1.69
MSH4O15457 OR51C1P-202ENST00000641159 1444 ntBASIC4.49□□□□□ -1.69
MSH4O15457 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
MSH4O15457 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSH4O15457 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSH4O15457 Y_RNA.126-201ENST00000363382 111 ntBASIC4.49□□□□□ -1.69
MSH4O15457 MIR7-1-201ENST00000384871 110 ntBASIC4.49□□□□□ -1.69
MSH4O15457 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH4O15457 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.49□□□□□ -1.69
MSH4O15457 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH4O15457 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH4O15457 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
MSH4O15457 VN1R105P-201ENST00000486595 910 ntBASIC4.49□□□□□ -1.69
MSH4O15457 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH4O15457 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.49□□□□□ -1.69
MSH4O15457 NDUFA5P2-201ENST00000519723 344 ntBASIC4.49□□□□□ -1.69
MSH4O15457 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH4O15457 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH4O15457 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH4O15457 AC084759.1-201ENST00000561168 290 ntBASIC4.49□□□□□ -1.69
MSH4O15457 AC120057.2-201ENST00000571520 271 ntBASIC4.49□□□□□ -1.69
MSH4O15457 MIR4286-201ENST00000580651 93 ntBASIC4.49□□□□□ -1.69
MSH4O15457 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH4O15457 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms