Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 Y_RNA.126-201ENST00000363382 111 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 SNORD115-48-201ENST00000364764 76 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 RNU6-317P-201ENST00000384031 107 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 SNORA70C-201ENST00000384538 135 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 MIR195-201ENST00000385194 87 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 MTND4P11-201ENST00000417020 1058 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 RPS27AP12-201ENST00000429552 465 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 MTND2P3-201ENST00000452458 470 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC006511.1-201ENST00000470614 315 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC025181.1-201ENST00000477507 416 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC012158.1-204ENST00000483430 465 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC105137.1-201ENST00000484355 562 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 PARP4P3-201ENST00000510265 317 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC026402.1-201ENST00000513642 170 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC090819.1-201ENST00000523800 1111 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC004923.2-201ENST00000529649 369 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 CYCSP29-201ENST00000533731 318 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC068446.3-201ENST00000555285 382 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC084757.1-201ENST00000559987 490 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC007224.1-201ENST00000564410 144 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AL096803.3-201ENST00000609032 532 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC243654.2-201ENST00000612843 443 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 AC067931.1-201ENST00000624190 671 ntBASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA1Q9UND3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 NXPH1-205ENST00000602349 1953 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AC139769.1-204ENST00000472297 1931 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 RNU4-31P-201ENST00000384211 141 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 MIR708-201ENST00000390708 88 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 HSPD1P16-201ENST00000402302 394 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 RN7SKP199-201ENST00000410325 305 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 RN7SKP263-201ENST00000411194 309 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 RPL23AP26-201ENST00000412728 464 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AC009237.10-201ENST00000414112 510 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 MTND4P24-201ENST00000424002 397 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 ZFAND6P1-201ENST00000434138 605 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 ACTR3P2-201ENST00000439585 1257 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 RPL23AP43-201ENST00000446445 471 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 MTND2P25-201ENST00000449028 610 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 FGF7P3-201ENST00000454645 303 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 RPS27AP17-201ENST00000463344 455 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AC025459.1-201ENST00000504072 156 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 RNA5SP446-201ENST00000515955 82 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 SNORD116-26-201ENST00000516006 96 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 MRPL49P2-201ENST00000521066 465 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 AC010857.1-201ENST00000606398 594 ntBASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPIPA1Q9UND3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms