Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 AC233266.2-201ENST00000567067 528 ntBASIC4.48□□□□□ -1.69
SPASTQ9UBP0 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 KPNA2P3-201ENST00000584190 848 ntBASIC4.48□□□□□ -1.69
SPASTQ9UBP0 AC011477.5-201ENST00000586571 259 ntBASIC4.48□□□□□ -1.69
SPASTQ9UBP0 AC005520.3-201ENST00000602874 370 ntBASIC4.48□□□□□ -1.69
SPASTQ9UBP0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 AP006248.2-201ENST00000623309 592 ntBASIC4.48□□□□□ -1.69
SPASTQ9UBP0 AC090617.9-201ENST00000623751 147 ntBASIC4.48□□□□□ -1.69
SPASTQ9UBP0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPASTQ9UBP0 SAGE2P-201ENST00000420011 2126 ntBASIC4.48□□□□□ -1.69
SPASTQ9UBP0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 MFSD8-220ENST00000641243 1422 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AL589826.1-201ENST00000340697 249 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 LINC01347-201ENST00000417964 355 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 CYCSP10-201ENST00000417973 294 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 RPL30P3-201ENST00000424262 333 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 FAM204CP-201ENST00000424489 642 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 CEACAMP1-201ENST00000434624 1035 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 ACTR3P2-201ENST00000439585 1257 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 CBX1P1-201ENST00000440184 427 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC097499.1-201ENST00000444277 208 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 ISCUP1-201ENST00000454451 448 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AL672167.3-201ENST00000465951 960 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC010618.1-201ENST00000469924 477 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AL161747.1-201ENST00000480068 358 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 RN7SL817P-201ENST00000480777 288 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 RPS4XP18-201ENST00000495480 763 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 IGKV2-36-201ENST00000519999 223 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AL121594.4-201ENST00000556211 1196 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC018618.2-201ENST00000604770 446 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC011374.2-201ENST00000607135 526 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC004775.1-201ENST00000607389 753 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC005086.4-201ENST00000623065 213 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC011944.2-201ENST00000624440 683 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 AC009951.1-201ENST00000623674 2614 ntBASIC4.47□□□□□ -1.69
SPASTQ9UBP0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SPASTQ9UBP0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
SPASTQ9UBP0 AL391684.1-202ENST00000641293 1636 ntBASIC4.46□□□□□ -1.69
SPASTQ9UBP0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.46□□□□□ -1.69
SPASTQ9UBP0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.46□□□□□ -1.69
SPASTQ9UBP0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SPASTQ9UBP0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
SPASTQ9UBP0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 AL139811.1-201ENST00000424779 2299 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 AC134882.1-201ENST00000603738 1676 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 OR56B2P-201ENST00000317102 954 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 MIR659-201ENST00000384963 97 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 RPL23AP59-201ENST00000399415 461 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 TCEA1P4-201ENST00000415066 844 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 MTND2P25-201ENST00000449028 610 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 RN7SL303P-201ENST00000469773 251 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 RPL23AP37-201ENST00000479658 549 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 OR52A4P-202ENST00000481634 799 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 AC103833.1-201ENST00000517442 172 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 OR4A2P-201ENST00000527276 913 ntBASIC4.46□□□□□ -1.7
SPASTQ9UBP0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SPASTQ9UBP0 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms