Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HACD3Q9P035 AL592494.2-201ENST00000425455 1548 ntBASIC4.49□□□□□ -1.69
HACD3Q9P035 AC090017.1-201ENST00000548612 1779 ntBASIC4.49□□□□□ -1.69
HACD3Q9P035 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HACD3Q9P035 PHKBP1-201ENST00000450951 1951 ntBASIC4.49□□□□□ -1.69
HACD3Q9P035 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HACD3Q9P035 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 MIR659-201ENST00000384963 97 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 MIR93-201ENST00000385024 80 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 RNU6-1176P-201ENST00000390955 107 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 AL078604.1-201ENST00000404609 466 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 RNU4-74P-201ENST00000411280 161 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.48□□□□□ -1.69
HACD3Q9P035 AL162388.1-201ENST00000450912 352 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.48□□□□□ -1.69
HACD3Q9P035 APOOP2-201ENST00000461561 539 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.48□□□□□ -1.69
HACD3Q9P035 AC090013.1-201ENST00000485147 480 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 AC107398.1-201ENST00000486904 505 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 MTCO2P9-201ENST00000503214 694 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.48□□□□□ -1.69
HACD3Q9P035 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.48□□□□□ -1.69
HACD3Q9P035 RN7SKP92-201ENST00000517266 244 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.48□□□□□ -1.69
HACD3Q9P035 AC137768.1-201ENST00000549998 553 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.48□□□□□ -1.69
HACD3Q9P035 AC093510.2-201ENST00000562820 896 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.48□□□□□ -1.69
HACD3Q9P035 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.48□□□□□ -1.69
HACD3Q9P035 AP001160.4-201ENST00000596971 382 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 AC234771.5-201ENST00000600161 514 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.48□□□□□ -1.69
HACD3Q9P035 AC010200.2-201ENST00000605098 235 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 AL121873.1-201ENST00000616013 524 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.48□□□□□ -1.69
HACD3Q9P035 AC145207.9-201ENST00000623802 325 ntBASIC4.48□□□□□ -1.69
HACD3Q9P035 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.48□□□□□ -1.69
HACD3Q9P035 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.48□□□□□ -1.69
HACD3Q9P035 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.48□□□□□ -1.69
HACD3Q9P035 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HACD3Q9P035 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.48□□□□□ -1.69
HACD3Q9P035 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
HACD3Q9P035 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.47□□□□□ -1.69
HACD3Q9P035 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HACD3Q9P035 MAPK10-304ENST00000641341 3984 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HACD3Q9P035 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HACD3Q9P035 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HACD3Q9P035 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HACD3Q9P035 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HACD3Q9P035 RNA5SP52-201ENST00000362448 134 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 SNORA63.3-201ENST00000362682 132 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 RHOT1P2-201ENST00000366423 333 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 RNU6-398P-201ENST00000384143 109 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 CYB5AP4-201ENST00000396692 399 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 RNU4-27P-201ENST00000410889 139 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HACD3Q9P035 OR6K4P-201ENST00000423179 955 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 RPL7AP25-201ENST00000423357 805 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 MTCO2P1-201ENST00000424648 477 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 RPS6P14-201ENST00000425165 719 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AL160175.1-201ENST00000428124 247 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.47□□□□□ -1.69
HACD3Q9P035 CDY14P-201ENST00000431260 1014 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AL132765.1-201ENST00000434165 553 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.47□□□□□ -1.69
HACD3Q9P035 CDY12P-201ENST00000440679 1015 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AL353748.1-201ENST00000440753 474 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AC114495.1-201ENST00000441274 436 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AL357520.1-201ENST00000441557 453 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.47□□□□□ -1.69
HACD3Q9P035 CDY13P-201ENST00000445813 1015 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 CDY23P-201ENST00000451661 1014 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AL354710.1-201ENST00000453641 246 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.47□□□□□ -1.69
HACD3Q9P035 RPS27AP17-201ENST00000463344 455 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AC053481.1-201ENST00000467217 306 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 METTL15P1-201ENST00000481421 1045 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 RN7SL812P-201ENST00000493791 279 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AK3P4-201ENST00000504283 583 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 HAUS1P1-201ENST00000505275 832 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AC111000.3-201ENST00000508057 576 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 PGBD4P4-201ENST00000509673 613 ntBASIC4.47□□□□□ -1.69
HACD3Q9P035 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.47□□□□□ -1.69
HACD3Q9P035 PARP4P3-201ENST00000510265 317 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms