Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL450338.1-201ENST00000407987 512 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 GNG5P5-201ENST00000420444 220 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AL035660.1-201ENST00000422041 222 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC093698.1-201ENST00000423843 571 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC073335.1-201ENST00000427776 363 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 VDAC1P6-201ENST00000430062 855 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 TMEM183AP1-205ENST00000432739 290 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AL353706.1-201ENST00000436728 494 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 NDUFS5P5-201ENST00000437256 321 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AL138878.2-201ENST00000440581 1241 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC073465.2-201ENST00000440938 498 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AP000281.1-201ENST00000444036 316 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AL163193.1-201ENST00000444895 788 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 COX6CP2-201ENST00000444980 225 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 MTCO1P48-201ENST00000448024 1096 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 ZNF114P1-201ENST00000453500 292 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AL645937.3-201ENST00000453647 936 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 ATP5LP5-201ENST00000483050 299 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC068724.1-201ENST00000487100 792 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 DUTP1-201ENST00000493631 470 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 ENPP7P11-201ENST00000505915 627 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC098976.1-201ENST00000513014 541 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 RNA5SP216-201ENST00000516111 123 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC091078.2-201ENST00000557145 559 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC012213.3-201ENST00000577199 777 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 NF1P5-201ENST00000588287 448 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 COX6CP7-201ENST00000597056 208 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC009237.13-201ENST00000603193 276 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AL596327.1-201ENST00000603629 213 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC106028.5-201ENST00000610332 395 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC013562.2-201ENST00000611632 603 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC116447.1-201ENST00000613153 453 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AP005431.1-201ENST00000618479 319 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC027088.4-201ENST00000611559 1947 ntBASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.34□□□□□ -1.55
CCM2LQ9NUG4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
CCM2LQ9NUG4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCM2LQ9NUG4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 SNORA58B-201ENST00000364259 136 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 Y_RNA.559-201ENST00000384686 107 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 RNA5SP241-201ENST00000391326 114 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 MIR1203-201ENST00000408812 85 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 OR3A2-201ENST00000408891 1076 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 RNU6-603P-201ENST00000411403 107 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 AL355433.1-201ENST00000422804 300 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 EEF1A1P1-201ENST00000447052 739 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 AL445466.1-201ENST00000448432 357 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 AC005077.1-201ENST00000449226 375 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 RPL36AP33-201ENST00000450395 310 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 KATNBL1P6-201ENST00000453433 915 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 RPS23P2-201ENST00000463671 415 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 RN7SL188P-201ENST00000469842 285 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 RN7SL193P-201ENST00000491708 276 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 AC006499.5-201ENST00000505037 514 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 AC091965.2-201ENST00000512324 613 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 MTCO2P32-201ENST00000514865 403 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 RNU6-583P-201ENST00000516012 92 ntBASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.33□□□□□ -1.56
CCM2LQ9NUG4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms