Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 OR56B2P-201ENST00000317102 954 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 SNORA37-201ENST00000384504 129 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 RNA5SP239-201ENST00000410218 129 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 SNRPFP1-201ENST00000414761 252 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 MAPRE1P3-201ENST00000435438 796 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 RPL23AP43-201ENST00000446445 471 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 PARP4P3-201ENST00000510265 317 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 AP003730.1-201ENST00000524605 285 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 AC015813.4-201ENST00000610469 179 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 AL161637.1-201ENST00000622380 412 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 OR5AC4P-202ENST00000642086 985 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 HSPD1P14-201ENST00000432666 1618 ntBASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 CPHL1P-201ENST00000461341 3407 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 U3.15-201ENST00000365398 212 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 RNU6-317P-201ENST00000384031 107 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 MTND4P11-201ENST00000417020 1058 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 Z74021.1-201ENST00000423610 407 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 CDC27P1-201ENST00000445384 715 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 HMGB1P26-201ENST00000452520 628 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 RNU6-1004P-201ENST00000516584 111 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 SLC25A36P1-201ENST00000590111 465 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 AC245389.2-201ENST00000616023 576 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 AC242843.1-201ENST00000618702 573 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 EIF2AP4-201ENST00000424793 1781 ntBASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.44□□□□□ -1.7
TM9SF3Q9HD45 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 MTND4P26-201ENST00000415971 1359 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AC005261.4-201ENST00000600047 1385 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AC008033.1-201ENST00000216407 1162 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 MIR448-201ENST00000362131 111 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 RPS27AP11-201ENST00000402798 447 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 RPL23AP48-201ENST00000406913 488 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 RPL7P33-201ENST00000444159 742 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 DHFRP3-201ENST00000455595 559 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 ATP5G1P3-201ENST00000463301 410 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AC041039.1-201ENST00000485656 536 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AL049870.4-201ENST00000555741 486 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AC106785.3-201ENST00000564064 847 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AC106785.1-201ENST00000565935 262 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AC015912.2-201ENST00000571053 181 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AC083899.3-201ENST00000603413 594 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AC113403.1-201ENST00000604910 193 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 MIR7973-1-201ENST00000614683 76 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AL139254.3-201ENST00000641097 674 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms